Add sensory corpuscle #3295
Add sensory corpuscle #3295
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Adds sensory corpuscle and positions Meissner, Pacinian, Ruffini and Herbst's under it.
src/ontology/uberon-edit.obo
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| synonym: "COEC" EXACT [PMID:35356056] | ||
| synonym: "cutaneous end-organ complex" EXACT [PMID:35356056] | ||
| xref: http://www.wikidata.org/entity/Q126363978 | ||
| is_a: UBERON:0005162 ! multi cell part structure |
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The definition of multi cell part structure is:
A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part.
In sensory corpuscles there are some complete cells. I'm not aware if there is a term that comprises parts of cells and complete cells, but I will have a look.
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The definition of
multi cell part structureis:A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part.
In sensory corpuscles there are some complete cells. I'm not aware if there is a term that comprises parts of cells and complete cells, but I will have a look.
Oh, curious. I had not seen the definition, I interpreted quite the oposite from the label!!
So apparently the capsule of the Pacinian corpuscle is being excluded altogether from the Pacinian corpuscle itself.
I'll copy that in the issue.
With new OWL API 4.5.29 we can now define idspaces for NIF_Subcellular. Its terms were mistakenly changed to the OBO namespace when using Protégé 5.6.5. This commit fixes that.
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This PR has not seen any activity in the past month; if nobody comments or reviews it in the next week, the PR creator will be allowed to proceed with merging without explicit approval, should they wish to do so. |
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@anitacaron what is missing in this PR? |
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From my part, it looks good. You can go ahead and finish your review. |
Adds sensory corpuscle and positions Meissner, Pacinian, Ruffini and Herbst's under it.
Related to #3290 .
Note: required for lamellar cell:
PS: Some other modifications happened on the file by the time of saving. Not sure how to avoid them.