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Add SVStratify and GroupedSVCluster tools Build and Test GATK 4 #4683: Pull request #8990 synchronize by mwalker174
October 2, 2024 18:58 25m 34s mw_sv_stratify
mw_sv_stratify
October 2, 2024 18:58 25m 34s
Add SVStratify and GroupedSVCluster tools Build and Test GATK 4 #4682: Pull request #8990 opened by mwalker174
October 2, 2024 17:13 53m 14s mw_sv_stratify
mw_sv_stratify
October 2, 2024 17:13 53m 14s
Funcotator - removing the required transcript file Build and Test GATK 4 #4681: Pull request #8863 synchronize by jamesemery
October 1, 2024 13:59 54m 32s jts_funcotator_extract_transcripts_from_reference
jts_funcotator_extract_transcripts_from_reference
October 1, 2024 13:59 54m 32s
VS-1422 Merge VAT changes in echo into ah_var_store Build and Test GATK 4 #4680: Pull request #8977 synchronize by gbggrant
October 1, 2024 01:23 31m 7s gg_VS-1422_MergeVATChangesInEchoIntoAhVarStore
gg_VS-1422_MergeVATChangesInEchoIntoAhVarStore
October 1, 2024 01:23 31m 7s
VS-1422 Merge VAT changes in echo into ah_var_store Build and Test GATK 4 #4679: Pull request #8977 synchronize by gbggrant
September 30, 2024 17:08 1h 16m 31s gg_VS-1422_MergeVATChangesInEchoIntoAhVarStore
gg_VS-1422_MergeVATChangesInEchoIntoAhVarStore
September 30, 2024 17:08 1h 16m 31s
VS-1422 Merge VAT changes in echo into ah_var_store Build and Test GATK 4 #4678: Pull request #8977 synchronize by gbggrant
September 30, 2024 14:44 1h 25m 7s gg_VS-1422_MergeVATChangesInEchoIntoAhVarStore
gg_VS-1422_MergeVATChangesInEchoIntoAhVarStore
September 30, 2024 14:44 1h 25m 7s
(Do not merge) Port of nvscorevariants into GATK, with a basic tool frontend Build and Test GATK 4 #4677: Pull request #8004 synchronize by droazen
September 27, 2024 20:38 29m 37s dr_nvscorevariants
dr_nvscorevariants
September 27, 2024 20:38 29m 37s
(Do not merge) Port of nvscorevariants into GATK, with a basic tool frontend Build and Test GATK 4 #4676: Pull request #8004 synchronize by droazen
September 27, 2024 20:33 3m 9s dr_nvscorevariants
dr_nvscorevariants
September 27, 2024 20:33 3m 9s
(Do not merge) Port of nvscorevariants into GATK, with a basic tool frontend Build and Test GATK 4 #4675: Pull request #8004 synchronize by droazen
September 27, 2024 20:17 25m 42s dr_nvscorevariants
dr_nvscorevariants
September 27, 2024 20:17 25m 42s
(Do not merge) Port of nvscorevariants into GATK, with a basic tool frontend Build and Test GATK 4 #4674: Pull request #8004 synchronize by droazen
September 27, 2024 20:13 54m 10s dr_nvscorevariants
dr_nvscorevariants
September 27, 2024 20:13 54m 10s
(Do not merge) Port of nvscorevariants into GATK, with a basic tool frontend Build and Test GATK 4 #4673: Pull request #8004 synchronize by droazen
September 27, 2024 18:53 55m 21s dr_nvscorevariants
dr_nvscorevariants
September 27, 2024 18:53 55m 21s
Updates to VcfComparator (#8973) Build and Test GATK 4 #4672: Commit 2e459a5 pushed by meganshand
September 27, 2024 15:59 54m 52s master
master
September 27, 2024 15:59 54m 52s
Gg vs 1990 a widdle cleanup Build and Test GATK 4 #4671: Pull request #8970 synchronize by gbggrant
September 27, 2024 13:53 1h 9m 29s gg_VS-1990_AWiddleCleanup
gg_VS-1990_AWiddleCleanup
September 27, 2024 13:53 1h 9m 29s
Gg vs 1990 a widdle cleanup Build and Test GATK 4 #4670: Pull request #8970 synchronize by gbggrant
September 27, 2024 13:50 1h 13m 39s gg_VS-1990_AWiddleCleanup
gg_VS-1990_AWiddleCleanup
September 27, 2024 13:50 1h 13m 39s
Warn instead of throwing when querying intervals that were not in Gen… Build and Test GATK 4 #4669: Commit 3401a33 pushed by lbergelson
September 25, 2024 22:01 53m 33s master
master
September 25, 2024 22:01 53m 33s
Switch to logging a warning instead of an exception for intervals in query that were not part of GenomicsDBImport Build and Test GATK 4 #4668: Pull request #8987 opened by nalinigans
September 25, 2024 20:32 52m 57s nalinigans:ng_8715
nalinigans:ng_8715
September 25, 2024 20:32 52m 57s
Updates to VcfComparator Build and Test GATK 4 #4667: Pull request #8973 synchronize by meganshand
September 25, 2024 18:59 17m 37s ms_vcf_comparator_updates
ms_vcf_comparator_updates
September 25, 2024 18:59 17m 37s
Swapped mito mode in Mutect to use the mode argument utils, providing… Build and Test GATK 4 #4666: Commit e1b5f95 pushed by jamesemery
September 24, 2024 14:08 55m 46s master
master
September 24, 2024 14:08 55m 46s
Swapped mito mode in Mutect to use the mode argument utils Build and Test GATK 4 #4665: Pull request #8986 synchronize by jamesemery
September 23, 2024 19:48 54m 2s je_refactorMitoMode
je_refactorMitoMode
September 23, 2024 19:48 54m 2s
Swapped mito mode in Mutect to use the mode argument utils Build and Test GATK 4 #4664: Pull request #8986 opened by jamesemery
September 23, 2024 19:44 54m 25s je_refactorMitoMode
je_refactorMitoMode
September 23, 2024 19:44 54m 25s
Test out the preview version of the next GKL (DO NOT MERGE) Build and Test GATK 4 #4663: Pull request #8712 synchronize by lbergelson
September 23, 2024 18:15 54m 14s dr_test_intel_pdhmm
dr_test_intel_pdhmm
September 23, 2024 18:15 54m 14s
FlowFeatureMapper speed improvements Build and Test GATK 4 #4662: Pull request #8982 synchronize by dror27
September 23, 2024 14:14 35m 36s Ultimagen:optimize-ffm-2
Ultimagen:optimize-ffm-2
September 23, 2024 14:14 35m 36s
FlowFeatureMapper speed improvements Build and Test GATK 4 #4661: Pull request #8982 synchronize by dror27
September 23, 2024 13:32 Action required Ultimagen:optimize-ffm-2
Ultimagen:optimize-ffm-2
September 23, 2024 13:32 Action required
FlowFeatureMapper speed improvements Build and Test GATK 4 #4660: Pull request #8982 synchronize by dror27
September 23, 2024 12:19 Action required Ultimagen:optimize-ffm-2
Ultimagen:optimize-ffm-2
September 23, 2024 12:19 Action required
FlowFeatureMapper speed improvements Build and Test GATK 4 #4659: Pull request #8982 synchronize by dror27
September 23, 2024 12:16 Action required Ultimagen:optimize-ffm-2
Ultimagen:optimize-ffm-2
September 23, 2024 12:16 Action required