Update the Intel GKL to the latest release, 0.8.11 #2744
gatk-tests.yml
on: pull_request
check if the environment has privileges
0s
build and push gatk docker to artifacts
28m 38s
Validate script WDLs using womtools
2m 51s
Validate generated WDLs using womtools
16m 23s
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
Annotations
1 error and 6 warnings
Java 17.0.6+10 test on docker unit
An error occurred while attempting to read the response stream
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WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.
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WDL test RUN_CNN_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.
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WDL test RUN_M2_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.
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WDL test RUN_CNV_SOMATIC_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.
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WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.
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WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.
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Artifacts
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gatkDockerImage
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2.07 GB |
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test-results-17.0.6+10-cloud
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330 KB |
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test-results-17.0.6+10-integration
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4.31 MB |
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test-results-17.0.6+10-unit
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155 MB |
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test-results-docker-17.0.6+10-conda
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288 KB |
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test-results-docker-17.0.6+10-integration
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4.23 MB |
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test-results-docker-17.0.6+10-unit
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154 MB |
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test-results-docker-17.0.6+10-variantcalling
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12.3 MB |
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