Build and Test GATK 4

Non-GVS bits required for GVS [VS-971] (#8362) #2688

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Triggered via push June 27, 2023 18:09

mcovarr

master

Status Success

Total duration 1h 28m 39s

Artifacts 8

This run and associated checks have been archived and are scheduled for deletion. Learn more about checks retention

gatk-tests.yml

on: push

check if the environment has privileges

build and push gatk docker to artifacts

Validate script WDLs using womtools

Validate generated WDLs using womtools

Matrix: wdlTests

Matrix: test

Matrix: testOnDocker

Annotations

3 errors and 1 warning

Java 17.0.6+10 test on docker unit

An error occurred while attempting to read the response stream

Java 17.0.6+10 test on docker conda

An error occurred while attempting to read the response stream

Java 17.0.6+10 test on docker integration

An error occurred while attempting to read the response stream

Java 17.0.6+10 test on docker variantcalling

You are running out of disk space. The runner will stop working when the machine runs out of disk space. Free space left: 98 MB

Artifacts

Produced during runtime

Name	Size
gatkDockerImage Expired	2.07 GB
test-results-17.0.6+10-cloud Expired	331 KB
test-results-17.0.6+10-integration Expired	4.34 MB
test-results-17.0.6+10-unit Expired	155 MB
test-results-docker-17.0.6+10-conda Expired	288 KB
test-results-docker-17.0.6+10-integration Expired	4.27 MB
test-results-docker-17.0.6+10-unit Expired	154 MB
test-results-docker-17.0.6+10-variantcalling Expired	12.3 MB