Updates to VcfComparator (#8973) #4672

Job	Run time
build and push gatk docker to artifacts	16m 40s
Validate script WDLs using womtools	54s
check if the environment has privileges	1s
Validate generated WDLs using womtools	14m 16s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	25m 38s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	26m 8s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	25m 7s
WDL test RUN_M2_WDL on cromwell	17m 14s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	12m 20s
Java 17.0.6+10 build and test cloud	19m 42s
Java 17.0.6+10 build and test integration	32m 28s
Java 17.0.6+10 build and test unit	21m 7s
Java 17.0.6+10 test on docker integration	37m 51s
Java 17.0.6+10 test on docker unit	22m 18s
Java 17.0.6+10 test on docker variantcalling	32m 34s
Java 17.0.6+10 test on docker conda	26m 54s
	5h 31m 12s

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