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Build and Test GATK 4

Tweak extract values based on Echo Runs [VS-1432] #4647

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Tweak extract values based on Echo Runs [VS-1432]

Tweak extract values based on Echo Runs [VS-1432] #4647

Run time

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Job Run time
check if the environment has privileges
1s
check if the environment has privileges
1s
build and push gatk docker to artifacts
32m 58s
build and push gatk docker to artifacts
32m 58s
Validate generated WDLs using womtools
13m 25s
Validate generated WDLs using womtools
13m 25s
Validate script WDLs using womtools
50s
Validate script WDLs using womtools
50s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell
41m 7s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell
41m 7s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell
44m 13s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell
44m 13s
WDL test RUN_CNV_SOMATIC_WDL on cromwell
48m 21s
WDL test RUN_CNV_SOMATIC_WDL on cromwell
48m 21s
WDL test RUN_M2_WDL on cromwell
40m 13s
WDL test RUN_M2_WDL on cromwell
40m 13s
WDL test RUN_CNN_WDL on cromwell
34m 23s
WDL test RUN_CNN_WDL on cromwell
34m 40s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell
29m 27s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell
29m 27s
Java 17.0.6+10 build and test cloud
25m 53s
Java 17.0.6+10 build and test cloud
25m 53s
Java 17.0.6+10 build and test integration
33m 18s
Java 17.0.6+10 build and test integration
33m 18s
Java 17.0.6+10 build and test unit
21m 8s
Java 17.0.6+10 build and test unit
21m 8s
Java 17.0.6+10 test on docker integration
38m 5s
Java 17.0.6+10 test on docker integration
38m 5s
Java 17.0.6+10 test on docker unit
22m 53s
Java 17.0.6+10 test on docker unit
22m 53s
Java 17.0.6+10 test on docker variantcalling
34m 11s
Java 17.0.6+10 test on docker variantcalling
34m 11s
Java 17.0.6+10 test on docker conda
29m 39s
Java 17.0.6+10 test on docker conda
29m 39s
16h 20m 27s