Updates to VcfComparator #4628

Job	Run time
check if the environment has privileges	1s
Validate generated WDLs using womtools	14m 24s
Validate script WDLs using womtools	55s
build and push gatk docker to artifacts	16m 56s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	23m 43s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	26m 44s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	24m 42s
WDL test RUN_M2_WDL on cromwell	16m 31s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	12m 47s
Java 17.0.6+10 build and test cloud	21m 8s
Java 17.0.6+10 build and test integration	34m 11s
Java 17.0.6+10 build and test unit	20m 41s
Java 17.0.6+10 test on docker integration	40m 14s
Java 17.0.6+10 test on docker unit	23m 0s
Java 17.0.6+10 test on docker variantcalling	32m 35s
Java 17.0.6+10 test on docker conda	25m 39s
	5h 34m 11s

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