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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 449 151

  2. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 143 24

  3. ensembl-rest ensembl-rest Public

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 139 62

  4. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 138 115

  5. ensembl ensembl Public

    The Ensembl Core Perl API and SQL schema

    Perl 79 75

  6. ensembl-pipeline ensembl-pipeline Public

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 60 29

Repositories

Showing 10 of 209 repositories
  • ensembl-production Public

    Ensembl Production code

    Ensembl/ensembl-production’s past year of commit activity
    Perl 11 Apache-2.0 41 0 6 Updated Oct 7, 2024
  • ensembl-genomio Public

    Pipelines to turn basic genomic data into Ensembl cores and back

    Ensembl/ensembl-genomio’s past year of commit activity
    Python 9 Apache-2.0 7 0 1 Updated Oct 7, 2024
  • ensembl-utils Public

    Ensembl python utils

    Ensembl/ensembl-utils’s past year of commit activity
    Python 3 Apache-2.0 1 0 0 Updated Oct 7, 2024
  • ensembl-metadata Public

    API for storing and querying metadata from Ensembl and EnsemblGenomes

    Ensembl/ensembl-metadata’s past year of commit activity
    Perl 5 Apache-2.0 5 0 1 Updated Oct 7, 2024
  • ensembl-production-imported Public

    Production pipelines used by data-teams to process imported genomes (former EnsemblGenomes pipelines)

    Ensembl/ensembl-production-imported’s past year of commit activity
    Perl 0 Apache-2.0 4 0 1 Updated Oct 7, 2024
  • Ensembl/ensembl-web-tools-api’s past year of commit activity
    Python 0 Apache-2.0 0 0 2 Updated Oct 7, 2024
  • ensembl-client Public

    Ensembl beta client

    Ensembl/ensembl-client’s past year of commit activity
    TypeScript 13 Apache-2.0 3 0 3 Updated Oct 7, 2024
  • ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Ensembl/ensembl-compara’s past year of commit activity
    Perl 51 Apache-2.0 69 0 5 Updated Oct 7, 2024
  • plant-scripts Public

    Scripting analyses of genomes in Ensembl Plants

    Ensembl/plant-scripts’s past year of commit activity
    Perl 36 Apache-2.0 8 1 0 Updated Oct 7, 2024
  • public-plugins Public

    Plugins for an Ensembl website

    Ensembl/public-plugins’s past year of commit activity
    JavaScript 9 Apache-2.0 46 0 1 Updated Oct 4, 2024