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docs: update package version and readme
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y1zhou committed Oct 20, 2022
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3 changes: 3 additions & 0 deletions README.rst
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Expand Up @@ -28,10 +28,13 @@ Metabolic reprogramming Knowledgebase

A Python package that aggregates the data from BRENDA_ and BioCyc_ into one unified `graph database`_.
The MetaCyc (BioCyc) database is imported to a graph database using the provided SBML file and various ``.dat`` files.
A `Streamlit`_ app is `included in the code`_ for easy route search with both example TCGA datasets and custom CSV files.

.. _BRENDA: https://brenda-enzymes.org/
.. _BioCyc: https://biocyc.org/
.. _graph database: https://neo4j.com/
.. _Streamlit: https://streamlit.io/
.. _included in the code: https://github.com/y1zhou/metabolike/blob/main/metabolike/api/main.py

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2 changes: 1 addition & 1 deletion metabolike/__init__.py
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"""
Build graph database from BRENDA and BioCyc for studying reprogrammed metabolisms.
"""
__version__ = "0.4.1"
__version__ = "0.5.0"

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