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Add prefix genbase (biopragmatics#1140)
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* Added prefix genbase

* Fixed formatting error

* added contact name

* Moved misplaced example

* updated contact info for genbase
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tanayshah2 authored Jul 8, 2024
1 parent 202b44e commit 757e683
Showing 1 changed file with 57 additions and 0 deletions.
57 changes: 57 additions & 0 deletions src/bioregistry/data/bioregistry.json
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},
"uri_format": "https://www.ncbi.nlm.nih.gov/nucleotide/$1"
},
"genbase": {
"contact": {
"email": "[email protected]",
"name": "Xuetong Zhao"
},
"contributor": {
"email": "[email protected]",
"github": "tanayshah2",
"name": "Tanay Shah",
"orcid": "0009-0001-1912-5132"
},
"description": "GenBase is a genetic sequence database that accepts user submissions (mRNA, genomic DNAs, ncRNA, or small genomes such as organelles, viruses, plasmids, phages from any organism) and integrates data from INSDC.",
"example": "C_AA001108.1",
"fairsharing": {
"abbreviation": "5451",
"contact": {
"email": "[email protected]",
"name": "Xuetong Zhao"
},
"description": "GenBase is a genetic sequence database that accepts user submissions (mRNA, genomic DNAs, ncRNA, or small genomes such as organelles, viruses, plasmids, phages from any organism) and integrates data from INSDC.",
"domains": [
"Plastid",
"Organelle",
"Plasmid",
"Sequence",
"Genome",
"Genotype"
],
"homepage": "https://ngdc.cncb.ac.cn/genbase/?lang=en",
"name": "GenBase",
"prefix": "FAIRsharing.fc8976",
"subjects": [
"Animal Genetics",
"Genetics",
"Human Genetics",
"Microbial Genetics",
"Molecular Genetics",
"Plant Genetics"
],
"user_defined_tags": [
"Circrna"
]
},
"homepage": "https://ngdc.cncb.ac.cn/genbase/?lang=en",
"mappings": {
"fairsharing": "FAIRsharing.3da56b",
"re3data": "r3d100014353"
},
"name": "GenBase",
"re3data": {
"description": "GenBase is a genetic sequence database that accepts user submissions (mRNA, genomic DNAs, ncRNA, or small genomes such as organelles, viruses, plasmids, phages from any organism) and integrates data from INSDC.",
"homepage": "https://ngdc.cncb.ac.cn/genbase/?lang=en",
"name": "GenBase",
"prefix": "r3d100014353"
},
"uri_format": "https://ngdc.cncb.ac.cn/genbase/search/gb/$1"
},
"gendis": {
"comment": "This resource doesn't exist on the web anymore",
"deprecated": true,
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