Clinical Backend Final v1.0.0

What's Changed

• fix: update patient registration workflow by @Salaton in #81
• feat: implement create organization by @Salaton in #82
• feat: create FHIR observations by @Salaton in #83
• feat: create FHIR allergy intolerance by @Salaton in #84
• feat: create fhir medication statement by @Muchogoc in #85
• feat: create test result FHIR observation by @Salaton in #86
• fix: store vital signs value as value strings by @Salaton in #88
• chore: create organization pubsub topic by @Salaton in #89
• chore: add graphql medication statement and medication types by @Muchogoc in #90
• feat: medication statement search by @Muchogoc in #91
• feat: simple health timeline by @Muchogoc in #87
• fix: create observations and patient timeline count by @Muchogoc in #92
• fix: change medication statement in timeline by @Muchogoc in #93
• feat: fetching medical data: allergies, regimen, weight, bmi, viral by @Muchogoc in #94
• chore: add fhir organisation id to mycarehub facilities by @KathurimaKimathi in #95
• chore: push schema to prod and staging schema registry by @Salaton in #97
• chore: add patient and organization names in observations by @KathurimaKimathi in #96
• chore: remove redundant onboarding service by @Muchogoc in #98
• chore: setup sentry by @KathurimaKimathi in #99
• chore: paginated patient health timeline by @Muchogoc in #104
• chore: refactor clinical code by @KathurimaKimathi in #102
• chore:delete patient isc endpoint by @KathurimaKimathi in #107
• chore: remove organization from allergy intolerance by @KathurimaKimathi in #108
• fix: fhir allergy intolerance payload composition by @Muchogoc in #109
• fix: add manifestation to allergy intolerance payload by @Salaton in #110
• fix: purge observation resources before deleting patient resource by @Salaton in #111
• chore: restructure medical data pubsub subscription by @Muchogoc in #112
• ci: separate deployment workflow into different files by @Salaton in #113
• ci: deploy demo environment by @Salaton in #114
• chore: add mycarehub demo to deps.yaml by @Salaton in #115
• ci: push schema to demo schema registry by @Salaton in #116
• chore(deps): bump serverutils version by @Salaton in #117
• chore: assorted chores by @KathurimaKimathi in #119
• fix(ci): update push to test schema registry workflow by @Salaton in #120
• chore: remove sentry error reporting on some methods by @Salaton in #121
• chore: update error messages sent to sentry by @Salaton in #122
• feat(ci): deploy multitenant staging environment by @Salaton in #123
• feat: authenticate APIs using slade auth server by @Salaton in #129
• chore: fix multitenant staging deployment by @Salaton in #130
• chore: purge firebase implementation by @Salaton in #131
• chore: purge casbin authorization implementation by @Salaton in #132
• refactor: combine clinical and fhir usecase by @Salaton in #133
• refactor: move fhirdataset into cloudhealthcare by @Salaton in #134
• refactor: move create patient logic into the infrastructure layer by @Salaton in #135
• refactor: move some logic into infra layers by @Salaton in #136
• refactor: move search patient logic to infra layer by @Salaton in #137
• feat: add graphql api to create fhir organization by @Salaton in #139
• chore: add meta and extension structs by @Salaton in #140
• fix: remove dependency between pubsub and ocl usecase by @Salaton in #142
• feat: introduce ID extraction middleware by @Salaton in #143
• chore: remove pubsub code from extension file by @Salaton in #144
• feat: retrieve tenant identifiers from context by @Salaton in #145
• feat: verify organisation provided in header exists by @Muchogoc in #146
• feat: add tags when creating resources by @Muchogoc in #147
• chore: upgrade go to 1.19 by @Muchogoc in #149
• chore: remove unused use-casess by @Muchogoc in #150
• chore: update code to adhere to additional Go linting rules by @Muchogoc in #151
• feat: introduce gin and retire mux router by @Salaton in #152
• chore: additional linters to improve code quality by @Muchogoc in #153
• chore: remove redundant mocks by @Muchogoc in #154
• chore: add search resource dataset helper method by @Muchogoc in #155
• chore: refactor dataset.go by @Salaton in #156
• chore: unmarshal to a resource in create resource dataset method by @Muchogoc in #157
• refactor: move pubsub webhook implementation from infrastructure to u… by @Salaton in #158
• chore: whitespace linter by @Muchogoc in #159
• test: add fhir unit tests by @Salaton in #160
• ref: datastore resource methods by @Muchogoc in #161
• tests: add sad cases to usecase unit tests by @Salaton in #162
• chore: add unit tests by @maxwellgithinji in #163
• chore: add mycarehub service unit tests by @maxwellgithinji in #164
• tests: fhir unit test by @Muchogoc in #165
• chore: add helper tests by @maxwellgithinji in #166
• tests: remove patient data test by @Muchogoc in #167
• chore: add common tests by @maxwellgithinji in #168
• tests: add pubsub usecase tests by @Salaton in #169
• test: usecase unit tests by @Muchogoc in #170
• test: ocl unit tests by @Muchogoc in #171
• tests: add domain layer tests by @Salaton in #172
• chore: setting up http routes by @Muchogoc in #173
• chore: test application packages by @maxwellgithinji in #174
• test: handlers unit tests by @Muchogoc in #175
• feat: api to create a tenant by @Muchogoc in #176
• feat: add create facility API by @Salaton in #178
• chore: Running gin in "release" mode for production by @Salaton in #179
• chore: facility request header by @Muchogoc in #180
• feat: create episode of care by @Muchogoc in #181
• feat: start encounter by @Salaton in #183
• feat: end encounter by @Salaton in #185
• chore: update health timeline struct by @maxwellgithinji in #184
• feat: list a patient's encounters by @Salaton in #187
• chore: update allergy intolerance to use minimal fhir resources by @maxwellgithinji in #186
• chore: add observation...