CHEBI OBO Slim

A slimmed down version of CHEBI sufficient to cover 99% of the term needs across OBO ontologies.

Maintainers

• @matentzn
• @shawntanzk

How to add additional terms?

1. Make a Pull request on https://github.com/obophenotype/chebi_obo_slim/blob/main/seed.txt. In the PR, indicate which terms you are adding (at least the ids) and for which ontology.
2. If you are a member of obophenotype organisation:
   • You should make sure seed.txt is sorted alphanumerically
   • Merge the changes without review at your own discretion
3. If you are not a member of obophenotype organisation:
   • Wait until a member of obophenotype deals with your PR

How to become a maintainer?

Open a an issue on the issue tracker with a request to join.

How to run a release?

1. Clone the repo
2. From within the repo run sh odk.sh make all (you need to have docker installed)
3. Commit any changed files to branch, make PR
4. Ask for a review from another maintainer
5. After a single approval, merge
6. Make a GitHub release with the usual OBO tag (i.e. v2022-09-21)