Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

ENH: add gradunwarp base workflow for f/smriprep. #819

Open
wants to merge 21 commits into
base: master
Choose a base branch
from
Open

ENH: add gradunwarp base workflow for f/smriprep. #819

wants to merge 21 commits into from

Commits on May 15, 2024

  1. add gradunwarp interface and workflow

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    37c1a0e View commit details
    Browse the repository at this point in the history

  2. finish gradunwarp wf

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    4e4d745 View commit details
    Browse the repository at this point in the history

  3. wip: integrating gradunwarp in the pipelines

    @bpinsard
    cneuromod_bot authored and bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    9855c77 View commit details
    Browse the repository at this point in the history

  4. xform warp from fsl to itk

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    9226dbb View commit details
    Browse the repository at this point in the history

  5. Update niworkflows/interfaces/gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    03f7e48 View commit details
    Browse the repository at this point in the history

  6. Update niworkflows/interfaces/gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    545c38b View commit details
    Browse the repository at this point in the history

  7. Update niworkflows/interfaces/gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    364ee76 View commit details
    Browse the repository at this point in the history

  8. Update niworkflows/interfaces/gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    4798577 View commit details
    Browse the repository at this point in the history

  9. Update niworkflows/interfaces/gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    baf8e45 View commit details
    Browse the repository at this point in the history

  10. Update niworkflows/workflows/tests/test_gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    8e85701 View commit details
    Browse the repository at this point in the history

  11. Update niworkflows/workflows/tests/test_gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    96e829f View commit details
    Browse the repository at this point in the history

  12. Update niworkflows/interfaces/gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    29f706d View commit details
    Browse the repository at this point in the history

  13. Update niworkflows/interfaces/gradunwarp.py 

    Co-authored-by: Chris Markiewicz <[email protected]>
    @bpinsard @effigies
    bpinsard and effigies committed May 15, 2024
    Configuration menu
    Copy the full SHA
    2e37161 View commit details
    Browse the repository at this point in the history

  14. fix typo

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    7bbf5c5 View commit details
    Browse the repository at this point in the history

  15. use nitransforms output for DisplacementField

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    6d9f77e View commit details
    Browse the repository at this point in the history

  16. add dependencies, use temporary nitransforms dev branch

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    9c0c3c5 View commit details
    Browse the repository at this point in the history

  17. fix flake8 tests

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    6d3d3e4 View commit details
    Browse the repository at this point in the history

  18. fix rebase mess

    @bpinsard
    bpinsard committed May 15, 2024
    Configuration menu
    Copy the full SHA
    fb04e5d View commit details
    Browse the repository at this point in the history

Commits on May 16, 2024

  1. fix interface

    @bpinsard
    bpinsard committed May 16, 2024
    Configuration menu
    Copy the full SHA
    9e3ae7e View commit details
    Browse the repository at this point in the history

Commits on May 17, 2024

  1. move to nitransforms master branch until release

    @bpinsard
    bpinsard committed May 17, 2024
    Configuration menu
    Copy the full SHA
    f55b387 View commit details
    Browse the repository at this point in the history

  2. install nipreps gradunwarp fork

    @bpinsard
    bpinsard committed May 17, 2024
    Configuration menu
    Copy the full SHA
    2c1507a View commit details
    Browse the repository at this point in the history