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Manually curate all algin modules #19

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Manually curate all algin modules

Manually curate all algin modules #19

Triggered via pull request July 5, 2024 14:30
@mirpedrolmirpedrol
synchronize #4
curate-align-modules
Status Failure
Total duration 15m 12s
Artifacts –

test.yml

on: pull_request
nf-test-changes
16s
nf-test-changes
prettier
6s
prettier
editorconfig
4s
editorconfig
pre-commit
9s
pre-commit
Matrix: nf-core-lint-modules
Matrix: nf-core-lint-modules
Matrix: nf-test
confirm-pass
0s
confirm-pass
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18 errors and 23 warnings
nf-core-lint-modules (muscle5/super5)
Process completed with exit code 1.
nf-test (modules/class-modules/famsa/align, docker)
Process completed with exit code 1.
nf-test (modules/class-modules/famsa/align, conda)
Process completed with exit code 1.
nf-test (modules/class-modules/magus/align, docker)
Process completed with exit code 1.
nf-test (modules/class-modules/famsa/align, singularity)
Process completed with exit code 1.
nf-test (modules/class-modules/magus/align, conda)
Process completed with exit code 1.
nf-test (modules/class-modules/learnmsa/align, conda)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/align, docker)
Process completed with exit code 1.
nf-test (modules/class-modules/magus/align, singularity)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/irmsd, docker)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/align, conda)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/tcs, docker)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/irmsd, conda)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/align, singularity)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/irmsd, singularity)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/tcs, conda)
Process completed with exit code 1.
nf-test (modules/class-modules/tcoffee/tcs, singularity)
Process completed with exit code 1.
confirm-pass
Process completed with exit code 1.
pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
nf-test (modules/class-modules/famsa/align, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/famsa/align, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/kalign/align, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/kalign/align, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/muscle5/super5, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/muscle5/super5, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/mtmalign/align, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/mtmalign/align, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/clustalo/align, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/clustalo/align, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/magus/align, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/magus/align, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/mafft, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/mafft, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/tcoffee/align, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/tcoffee/align, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/learnmsa/align, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/learnmsa/align, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/tcoffee/irmsd, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/tcoffee/irmsd, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (modules/class-modules/tcoffee/tcs, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
nf-test (modules/class-modules/tcoffee/tcs, singularity)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/