fix org_path and change it to mirpedrol #44
mirpedroltest.yml
on: pull_request
nf-test-changes
18s
pre-commit
54s
Matrix: nf-core-lint-modules
Matrix: nf-core-lint-modules
Matrix: nf-test
confirm-pass
0s
Annotations
124 errors and 1 warning
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nf-core-lint-modules (clustalo/treealign)
Process completed with exit code 1.
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nf-core-lint-modules (magus/treealign)
Process completed with exit code 1.
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nf-core-lint-modules (magus/guidetree)
Process completed with exit code 1.
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nf-core-lint-modules (clustalo/align)
Process completed with exit code 1.
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nf-core-lint-modules (mtmalign/align)
Process completed with exit code 1.
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nf-core-lint-modules (kalign/align)
Process completed with exit code 1.
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nf-core-lint-modules (muscle5/super5)
Process completed with exit code 1.
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nf-core-lint-modules (learnmsa/align)
Process completed with exit code 1.
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nf-core-lint-modules (famsa/guidetree)
Process completed with exit code 1.
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nf-core-lint-modules (famsa/treealign)
Process completed with exit code 1.
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nf-core-lint-modules (msa_alignment)
Process completed with exit code 1.
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nf-core-lint-modules (clustalo/guidetree)
Process completed with exit code 1.
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nf-core-lint-modules (mafft)
Process completed with exit code 1.
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nf-core-lint-modules (msa_guidetree)
Process completed with exit code 1.
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nf-core-lint-modules (famsa/align)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/irmsd)
Process completed with exit code 1.
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nf-core-lint-modules (pigz/compress)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/align)
Process completed with exit code 1.
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nf-core-lint-modules (magus/align)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/libalign)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/alncompare)
Process completed with exit code 1.
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nf-core-lint-modules (untar)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/seqreformat)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/tcs)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/structurealign)
Process completed with exit code 1.
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nf-core-lint-modules (tcoffee/treealign)
Process completed with exit code 1.
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nf-test (modules/mirpedrol/kalign/align, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/seqreformat, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/tcs, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/tcs, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/seqreformat, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/seqreformat, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/tcs, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/libalign, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/libalign, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/untar, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/untar, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/untar, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/mafft, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/mafft, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/learnmsa/align, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/learnmsa/align, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/mafft, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (subworkflows/mirpedrol/msa_guidetree, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/treealign, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/treealign, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/alncompare, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/treealign, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/mtmalign/align, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/mtmalign/align, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/mtmalign/align, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/alncompare, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/alncompare, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/structurealign, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/structurealign, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/structurealign, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/irmsd, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/guidetree, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/irmsd, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (subworkflows/mirpedrol/msa_guidetree, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/align, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/guidetree, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/guidetree, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/align, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/treealign, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/treealign, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/treealign, singularity)
The operation was canceled.
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nf-test (modules/mirpedrol/pigz/compress, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/irmsd, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/treealign, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/libalign, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/treealign, conda)
The operation was canceled.
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nf-test (modules/mirpedrol/muscle5/super5, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (subworkflows/mirpedrol/msa_guidetree, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/muscle5/super5, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/magus/align, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/pigz/compress, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/pigz/compress, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/treealign, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/muscle5/super5, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/align, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/treealign, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/tcoffee/align, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (subworkflows/mirpedrol/msa_alignment, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (subworkflows/mirpedrol/msa_alignment, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (subworkflows/mirpedrol/msa_alignment, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/guidetree, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/guidetree, conda)
The operation was canceled.
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nf-test (modules/mirpedrol/tcoffee/align, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/guidetree, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/guidetree, docker)
The operation was canceled.
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nf-test (modules/mirpedrol/kalign/align, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/kalign/align, singularity)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/guidetree, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/guidetree, singularity)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/treealign, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/align, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/treealign, singularity)
The operation was canceled.
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nf-test (modules/mirpedrol/famsa/align, conda)
The operation was canceled.
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nf-test (modules/mirpedrol/famsa/guidetree, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/guidetree, singularity)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/align, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/align, singularity)
The operation was canceled.
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nf-test (modules/mirpedrol/kalign/align, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/align, singularity)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/kalign/align, docker)
The operation was canceled.
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nf-test (modules/mirpedrol/famsa/align, singularity)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/align, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/align, conda)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/align, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/align, docker)
The operation was canceled.
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nf-test (modules/mirpedrol/famsa/treealign, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/treealign, docker)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/treealign, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/treealign, docker)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/guidetree, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/guidetree, conda)
The operation was canceled.
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nf-test (modules/mirpedrol/famsa/align, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/align, docker)
The operation was canceled.
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nf-test (modules/mirpedrol/clustalo/treealign, conda)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/clustalo/treealign, conda)
The operation was canceled.
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nf-test (modules/mirpedrol/famsa/guidetree, docker)
Canceling since a higher priority waiting request for 'Run tests-11' exists
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nf-test (modules/mirpedrol/famsa/guidetree, docker)
The operation was canceled.
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confirm-pass
Process completed with exit code 1.
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pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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