Merge pull request #1191 from milaboratory/mixcr-regression-tests/sc-…

…gex-generic Regression tests changes in the sc-gex-generic
milaboratory · Jun 27, 2023 · 34b19e9 · 34b19e9
2 parents 7b834e5 + 0b3b831
commit 34b19e9
Show file tree

Hide file tree

Showing 11 changed files with 11 additions and 11 deletions.
diff --git a/regression/presets/analyze/10x-5gex-cdr3.yaml b/regression/presets/analyze/10x-5gex-cdr3.yaml
@@ -172,7 +172,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/10x-5gex-full-length.yaml b/regression/presets/analyze/10x-5gex-full-length.yaml
@@ -172,7 +172,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/10x-5gex.yaml b/regression/presets/analyze/10x-5gex.yaml
@@ -172,7 +172,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/generic-single-cell-gex-with-umi.yaml b/regression/presets/analyze/generic-single-cell-gex-with-umi.yaml
@@ -172,7 +172,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/generic-single-cell-gex.yaml b/regression/presets/analyze/generic-single-cell-gex.yaml
@@ -172,7 +172,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/parse-bio-3gex.yaml b/regression/presets/analyze/parse-bio-3gex.yaml
@@ -980,7 +980,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/parse-bio-vdj-3gex.yaml b/regression/presets/analyze/parse-bio-vdj-3gex.yaml
@@ -980,7 +980,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/smartseq2-vdj-full-length.yaml b/regression/presets/analyze/smartseq2-vdj-full-length.yaml
@@ -172,7 +172,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/smartseq2-vdj.yaml b/regression/presets/analyze/smartseq2-vdj.yaml
@@ -172,7 +172,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/split-seq-3gex.yaml b/regression/presets/analyze/split-seq-3gex.yaml
@@ -786,7 +786,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7

diff --git a/regression/presets/analyze/split-seq-vdj-3gex.yaml b/regression/presets/analyze/split-seq-vdj-3gex.yaml
@@ -786,7 +786,7 @@ refineTagsAndSort:
 assemblePartial:
   overlappedOnly: false
   dropPartial: false
-  cellLevel: false
+  cellLevel: true
   parameters:
     kValue: 12
     kOffset: -7