Merge pull request #1776 from milaboratory/export-for-platforma

coveredFeaturesOnExport in specification
milaboratory · Sep 5, 2024 · 2254b57 · 2254b57
2 parents e555e82 + 6aa0dac
commit 2254b57
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/build.gradle.kts b/build.gradle.kts
@@ -134,7 +134,7 @@ val toObfuscate: Configuration by configurations.creating {
 val obfuscationLibs: Configuration by configurations.creating
 
 
-val mixcrAlgoVersion = "4.7.0-18-mitool-tag-types"
+val mixcrAlgoVersion = "4.7.0-20-export-for-platforma"
 // may be blank (will be inherited from mixcr-algo)
 val milibVersion = ""
 // may be blank (will be inherited from mixcr-algo or milib)

diff --git a/src/main/kotlin/com/milaboratory/mixcr/cli/CommandPresetSpecificationsForBack.kt b/src/main/kotlin/com/milaboratory/mixcr/cli/CommandPresetSpecificationsForBack.kt
@@ -1,5 +1,5 @@
 /*
- * Copyright (c) 2014-2023, MiLaboratories Inc. All Rights Reserved
+ * Copyright (c) 2014-2024, MiLaboratories Inc. All Rights Reserved
  *
  * Before downloading or accessing the software, please read carefully the
  * License Agreement available at:
@@ -21,6 +21,7 @@ import com.milaboratory.mixcr.presets.MiXCRParamsSpec
 import com.milaboratory.mixcr.presets.PresetSpecification
 import com.milaboratory.util.K_OM
 import com.milaboratory.util.K_YAML_OM
+import com.mixcr.util.K_JSON_OM
 import picocli.CommandLine.Command
 import picocli.CommandLine.Parameters
 import java.nio.file.Path
@@ -41,6 +42,8 @@ class CommandPresetSpecificationsForBack : MiXCRCommand(), MiXCRPresetAwareComma
         output.toAbsolutePath().parent.toFile().mkdirs()
         val preset = if (InputFileType.YAML.matches(Path.of(input))) {
             K_YAML_OM.readValue(Path.of(input).toFile())
+        } else if (InputFileType.JSON.matches(Path.of(input))) {
+            K_JSON_OM.readValue(Path.of(input).toFile())
         } else {
             paramsResolver.resolve(
                 MiXCRParamsSpec(input),