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joelnitta/README.md

Hello! 👋 I am a Associate Profesor at Chiba University studying ferns, an ancient and diverse lineage of vascular plants.

I am an enthusiastic adherent of reproducible data analysis, especially with R.

Please check out https://www.joelnitta.com/ for more info.

✨Repo highlights✨

R packages 📦

  • canaper: Categorial analysis of neo-and paleo-endemism
  • taxastand: Standardize species names across data sources
  • dwctaxon: Tools for working with Darwin Core Taxon data
  • rmdref: Tools for reference management in Rmarkdown
  • gbfetch: Fetch sequences from GenBank

Reproducible data analysis 📈

Example code 💻

Docker images 🐳

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  1. joelnitta-home joelnitta-home Public

    Personal website of Joel Nitta

    JavaScript 7 2

  2. taxastand taxastand Public

    Standardize taxonomy across different data sources

    R 20

  3. ropensci/canaper ropensci/canaper Public

    Categorical Anaysis of Neo- and Paleo-endemism in R

    R 7 2

  4. japan_ferns_spatial_phy japan_ferns_spatial_phy Public

    Spatial phylogenetics of Japanese ferns

    R 3

  5. canopylife canopylife Public

    Life in the canopy: Community trait assessments reveal substantial functional diversity among fern epiphytes

    R 1 1

  6. moorea_filmies moorea_filmies Public

    Ecophysiological differentiation between life stages in filmy ferns (Hymenophyllaceae)

    R 1