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Intersect target and truth for P&S [VS-1460] #8931

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merged 6 commits into from
Aug 1, 2024

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@mcovarr mcovarr commented Jul 30, 2024

When a target interval list is provided for exomes, create a saner truth bed that intersects the provided truth beds with this target interval list. Successful run here.

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LGTM

As mentioned in chat, it seems as though this correct change may have made the earlier filtering based on the target interval list redundant and unnecessary, but it should still be correct and ultimately wastes little effort

@mcovarr mcovarr merged commit 48f67fc into ah_var_store Aug 1, 2024
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@mcovarr mcovarr deleted the vs_1460_intersect_target_truth_ps branch August 1, 2024 16:54
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3 participants