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Fix GT header in PostprocessGermlineCNVCalls's --output-genotyped-intervals output #8621

Merged
merged 2 commits into from
Dec 14, 2023
Merged

Fix GT header in PostprocessGermlineCNVCalls's --output-genotyped-intervals output #8621

merged 2 commits into from
Dec 14, 2023

Commits on Dec 13, 2023

  1. Write gCNV interval output ID=GT header as Type=String 

    Incorrectly writing this as Type=Integer causes bcftools to misparse
the genotype field.
    @jmarshall
    jmarshall committed Dec 13, 2023
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  2. Use correct header types and numbers in test VCF file

    @jmarshall
    jmarshall committed Dec 13, 2023
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    42b67ad View commit details
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