adjust effective_extract_memory_gib sizes

broadinstitute · Sep 13, 2024 · f042176 · f042176
1 parent ec6d19e
commit f042176
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/scripts/variantstore/wdl/GvsExtractCallsetPgen.wdl b/scripts/variantstore/wdl/GvsExtractCallsetPgen.wdl
@@ -143,9 +143,9 @@ workflow GvsExtractCallsetPgen {
                                                                 else 200])
 
     Int effective_extract_memory_gib = if defined(extract_memory_override_gib) then select_first([extract_memory_override_gib])
-                                       else if effective_scatter_count <= 100 then 37 + extract_overhead_memory_override_gib
-                                           else if effective_scatter_count <= 500 then 17 + extract_overhead_memory_override_gib
-                                               else 9 + extract_overhead_memory_override_gib
+                                       else if effective_scatter_count <= 100 then 35 + extract_overhead_memory_override_gib
+                                           else if effective_scatter_count <= 500 then 15 + extract_overhead_memory_override_gib
+                                               else 5 + extract_overhead_memory_override_gib
     # WDL 1.0 trick to set a variable ('none') to be undefined.
     if (false) {
         File? none = ""