oops

broadinstitute · Jul 31, 2024 · 8a56b1b · 8a56b1b
1 parent 93b68cc
commit 8a56b1b
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/scripts/variantstore/wdl/GvsCalculatePrecisionAndSensitivity.wdl b/scripts/variantstore/wdl/GvsCalculatePrecisionAndSensitivity.wdl
@@ -553,6 +553,7 @@ task IntersectTargetIntervalListWithTruthBed {
 
         gatk IntervalListToBed -I ~{target_interval_list} -O "${target_bed}" --SORT
 
+        truth_bed="~{truth_bed}"
         intersected_truth_bed="${truth_bed%%.bed}"
         intersected_truth_bed="${intersected_truth_bed}_intersected.bed"