Free up space on github actions runners for all jobs. (#8386)

broadinstitute · Jun 28, 2023 · 3b95e6b · 3b95e6b
1 parent 01e45a2
commit 3b95e6b
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Showing 2 changed files with 20 additions and 6 deletions.
diff --git a/.github/actions/purge-runner-disk/action.yml b/.github/actions/purge-runner-disk/action.yml
@@ -0,0 +1,12 @@
+name: 'purge-runner-disk'
+description: 'Free up space on the runner image to prevent out-of-space errors during CI tests'
+runs:
+  using: "composite"
+  steps:
+    #Reclaim some disk space on the runner to prevent the WDL tasks from running out of space on the docker.
+    #https://github.com/actions/runner-images/issues/2840
+    - name: Reclaim some runner disk space
+      run: |
+        sudo rm -rf /usr/share/dotnet
+        sudo rm -rf "$AGENT_TOOLSDIRECTORY"
+      shell: bash
diff --git a/.github/workflows/gatk-tests.yml b/.github/workflows/gatk-tests.yml
@@ -42,6 +42,8 @@ jobs:
       - name: checkout gatk
         uses: actions/checkout@v3
 
+      - uses: ./.github/actions/purge-runner-disk
+
       - name: Extract metadata (tags, labels) for Docker
         id: meta
         uses: docker/metadata-action@v4
@@ -87,6 +89,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           fetch-depth: 0
+      - uses: ./.github/actions/purge-runner-disk
       - name: 'Set up java ${{ matrix.Java }}'
         uses: actions/setup-java@v3
         with:
@@ -161,6 +164,8 @@ jobs:
         with:
           fetch-depth: 0 #TODO make this shallow
 
+      - uses: ./.github/actions/purge-runner-disk
+
       - name: 'Set up java ${{ matrix.Java }}'
         uses: actions/setup-java@v3
         with:
@@ -250,6 +255,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           fetch-depth: 0
+      - uses: ./.github/actions/purge-runner-disk
       - name: Set up java 17
         uses: actions/setup-java@v3
         with:
@@ -270,6 +276,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           fetch-depth: 0
+      - uses: ./.github/actions/purge-runner-disk
       - name: Set up java 17
         uses: actions/setup-java@v3
         with:
@@ -292,15 +299,10 @@ jobs:
     continue-on-error: true
     name: WDL test ${{ matrix.wdlTest }} on cromwell
     steps:
-      #Reclaim some disk space on the runner to prevent the WDL tasks from running out of space on the docker.
-      #https://stackoverflow.com/questions/75536771/github-runner-out-of-disk-space-after-building-docker-image
-      - name: Reclaim some runner disk space
-        run: |
-          sudo rm -rf /usr/share/dotnet
-          sudo rm -rf "$AGENT_TOOLSDIRECTORY"
       - uses: actions/checkout@v3
         with:
           fetch-depth: 0
+      - uses: ./.github/actions/purge-runner-disk
       - name: pull lfs files
         run: git lfs pull
       - name: Set up java 17