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Add a native GATK implementation for 2bit references, and remove the dependency on the ADAM library Build and Test GATK 4 #3491: Pull request #8606 opened by droazen
December 8, 2023 06:20 1h 6m 23s dr_remove_adam_dependency
dr_remove_adam_dependency
December 8, 2023 06:20 1h 6m 23s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #612: Scheduled
December 8, 2023 05:22 14m 3s master
master
December 8, 2023 05:22 14m 3s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. carrot-test-run-from-pr-comment #4575: Issue comment #8561 (comment) created by gatk-bot
December 8, 2023 04:14 12s
December 8, 2023 04:14 12s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. Build and Test GATK 4 #3490: Pull request #8561 synchronize by samuelklee
December 8, 2023 03:28 59m 29s sl_python_version_update
sl_python_version_update
December 8, 2023 03:28 59m 29s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. carrot-test-run-from-pr-comment #4574: Issue comment #8561 (comment) created by gatk-bot
December 8, 2023 01:32 12s
December 8, 2023 01:32 12s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. Build and Test GATK 4 #3489: Pull request #8561 synchronize by samuelklee
December 8, 2023 00:40 1h 1m 54s sl_python_version_update
sl_python_version_update
December 8, 2023 00:40 1h 1m 54s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. carrot-test-run-from-pr-comment #4573: Issue comment #8561 (comment) created by gatk-bot
December 7, 2023 21:19 11s
December 7, 2023 21:19 11s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. Build and Test GATK 4 #3488: Pull request #8561 synchronize by samuelklee
December 7, 2023 20:34 58m 53s sl_python_version_update
sl_python_version_update
December 7, 2023 20:34 58m 53s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. carrot-test-run-from-pr-comment #4572: Issue comment #8561 (comment) created by gatk-bot
December 7, 2023 19:37 11s
December 7, 2023 19:37 11s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. Build and Test GATK 4 #3487: Pull request #8561 synchronize by samuelklee
December 7, 2023 18:57 58m 45s sl_python_version_update
sl_python_version_update
December 7, 2023 18:57 58m 45s
Allow custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4571: Issue comment #8464 (comment) created by gatk-bot
December 7, 2023 18:55 10s
December 7, 2023 18:55 10s
Allow custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4570: Issue comment #8464 (comment) created by gatk-bot
December 7, 2023 18:23 11s
December 7, 2023 18:23 11s
woops.... carrot-test-run-from-pr-comment #4569: Issue comment #8605 (comment) created by gatk-bot
December 7, 2023 18:08 14s
December 7, 2023 18:08 14s
woops.... carrot-test-run-from-pr-comment #4568: Issue comment #8605 (comment) created by gatk-bot
December 7, 2023 18:07 10s
December 7, 2023 18:07 10s
Allow custom ploidy regions in HaplotypeCaller Build and Test GATK 4 #3486: Pull request #8464 synchronize by rickymagner
December 7, 2023 18:00 1h 2m 51s tkay_PARploidy
tkay_PARploidy
December 7, 2023 18:00 1h 2m 51s
Allow custom ploidy regions in HaplotypeCaller Build and Test GATK 4 #3485: Pull request #8464 synchronize by rickymagner
December 7, 2023 17:25 1h 2m 50s tkay_PARploidy
tkay_PARploidy
December 7, 2023 17:25 1h 2m 50s
woops.... Build and Test GATK 4 #3484: Pull request #8605 synchronize by lbergelson
December 7, 2023 17:13 1h 1m 18s lb_refactor_ricky_stuff
lb_refactor_ricky_stuff
December 7, 2023 17:13 1h 1m 18s
woops.... Build and Test GATK 4 #3483: Pull request #8605 opened by lbergelson
December 7, 2023 17:11 1h 1m 51s lb_refactor_ricky_stuff
lb_refactor_ricky_stuff
December 7, 2023 17:11 1h 1m 51s
Allow custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4567: Issue comment #8464 (comment) created by gatk-bot
December 7, 2023 17:02 13s
December 7, 2023 17:02 13s
Allow custom ploidy regions in HaplotypeCaller Build and Test GATK 4 #3482: Pull request #8464 synchronize by lbergelson
December 7, 2023 16:38 1h 0m 41s tkay_PARploidy
tkay_PARploidy
December 7, 2023 16:38 1h 0m 41s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #611: Scheduled
December 7, 2023 05:22 14m 16s master
master
December 7, 2023 05:22 14m 16s
Rc vs 1036 updating docs for callset creation Build and Test GATK 4 #3481: Pull request #8600 synchronize by RoriCremer
December 7, 2023 03:33 1h 6m 0s rc-vs-1036-updating-docs-for-callset-creation
rc-vs-1036-updating-docs-for-callset-creation
December 7, 2023 03:33 1h 6m 0s
refactoring some stuff for clarity carrot-test-run-from-pr-comment #4566: Issue comment #8598 (comment) created by gatk-bot
December 6, 2023 22:16 11s
December 6, 2023 22:16 11s
refactoring some stuff for clarity carrot-test-run-from-pr-comment #4565: Issue comment #8598 (comment) created by gatk-bot
December 6, 2023 22:11 11s
December 6, 2023 22:11 11s
refactoring some stuff for clarity Build and Test GATK 4 #3480: Pull request #8598 synchronize by lbergelson
December 6, 2023 22:00 1h 1m 31s lb_refactor_ricky_stuff
lb_refactor_ricky_stuff
December 6, 2023 22:00 1h 1m 31s