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Passing implementation of custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4598: Issue comment #8609 (comment) created by droazen
December 9, 2023 01:12 13s
December 9, 2023 01:12 13s
Allow GenomicsDBImport to connect to az:// files without interference… Build and Test GATK 4 #3518: Commit 2ad4a3e pushed by lbergelson
December 9, 2023 01:09 59m 14s master
master
December 9, 2023 01:09 59m 14s
PrintFileDiagnostics for cram, crai and bai. (#8577) Build and Test GATK 4 #3517: Commit 5839cbd pushed by lbergelson
December 9, 2023 01:03 1h 0m 2s master
master
December 9, 2023 01:03 1h 0m 2s
Update http-nio and wire its new settings (#8611) Build and Test GATK 4 #3516: Commit 3b8b5bf pushed by lbergelson
December 9, 2023 00:36 1h 0m 46s master
master
December 9, 2023 00:36 1h 0m 46s
Update the GATK base image to a newer LTS ubuntu release carrot-test-run-from-pr-comment #4597: Issue comment #8610 (comment) created by gatk-bot
December 9, 2023 00:31 11s
December 9, 2023 00:31 11s
Passing implementation of custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4596: Issue comment #8609 (comment) created by lbergelson
December 9, 2023 00:03 14s
December 9, 2023 00:03 14s
Update the GATK base image to a newer LTS ubuntu release Build and Test GATK 4 #3515: Pull request #8610 synchronize by droazen
December 8, 2023 23:36 59m 31s dr_update_docker_base_image
dr_update_docker_base_image
December 8, 2023 23:36 59m 31s
Update http-nio and wire its new settings Build and Test GATK 4 #3514: Pull request #8611 synchronize by lbergelson
December 8, 2023 23:18 1m 35s lb_http_nio_update
lb_http_nio_update
December 8, 2023 23:18 1m 35s
Update http-nio and wire its new settings Build and Test GATK 4 #3513: Pull request #8611 opened by lbergelson
December 8, 2023 23:07 1h 1m 1s lb_http_nio_update
lb_http_nio_update
December 8, 2023 23:07 1h 1m 1s
Passing implementation of custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4595: Issue comment #8609 (comment) created by rickymagner
December 8, 2023 22:35 13s
December 8, 2023 22:35 13s
Passing implementation of custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4594: Issue comment #8609 (comment) created by droazen
December 8, 2023 22:27 12s
December 8, 2023 22:27 12s
Passing implementation of custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4593: Issue comment #8609 (comment) created by rickymagner
December 8, 2023 22:24 10s
December 8, 2023 22:24 10s
Passing implementation of custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4592: Issue comment #8609 (comment) created by rickymagner
December 8, 2023 22:22 10s
December 8, 2023 22:22 10s
Passing implementation of custom ploidy regions in HaplotypeCaller Build and Test GATK 4 #3512: Pull request #8609 synchronize by rickymagner
December 8, 2023 22:16 1h 4m 43s lb_PAR_ploidy
lb_PAR_ploidy
December 8, 2023 22:16 1h 4m 43s
GenomicsDB on azure Build and Test GATK 4 #3511: Pull request #8438 synchronize by lbergelson
December 8, 2023 22:15 1h 1m 32s lb_genomicsdb_on_azure
lb_genomicsdb_on_azure
December 8, 2023 22:15 1h 1m 32s
Update the GATK base image to a newer LTS ubuntu release Build and Test GATK 4 #3510: Pull request #8610 opened by droazen
December 8, 2023 22:15 33m 44s dr_update_docker_base_image
dr_update_docker_base_image
December 8, 2023 22:15 33m 44s
Update dependencies to address security vulnerabilities, and add a se… Build and Test GATK 4 #3509: Commit e2c5fab pushed by droazen
December 8, 2023 21:57 1h 2m 41s master
master
December 8, 2023 21:57 1h 2m 41s
Passing implementation of custom ploidy regions in HaplotypeCaller carrot-test-run-from-pr-comment #4591: Issue comment #8609 (comment) created by droazen
December 8, 2023 21:55 14s
December 8, 2023 21:55 14s
Passing implementation of custom ploidy regions in HaplotypeCaller Build and Test GATK 4 #3508: Pull request #8609 opened by lbergelson
December 8, 2023 21:54 13m 25s lb_PAR_ploidy
lb_PAR_ploidy
December 8, 2023 21:54 13m 25s
Update dependencies to address security vulnerabilities, and add a security scanner to build.gradle Build and Test GATK 4 #3507: Pull request #8607 synchronize by droazen
December 8, 2023 20:50 1h 4m 34s dr_dependency_security_update
dr_dependency_security_update
December 8, 2023 20:50 1h 4m 34s
Add a native GATK implementation for 2bit references, and remove the … Build and Test GATK 4 #3506: Commit bf24519 pushed by droazen
December 8, 2023 20:46 1h 4m 2s master
master
December 8, 2023 20:46 1h 4m 2s
Add a native GATK implementation for 2bit references, and remove the dependency on the ADAM library Build and Test GATK 4 #3505: Pull request #8606 synchronize by droazen
December 8, 2023 19:28 1h 2m 28s dr_remove_adam_dependency
dr_remove_adam_dependency
December 8, 2023 19:28 1h 2m 28s
GenomicsDB on azure carrot-test-run-from-pr-comment #4590: Issue comment #8438 (comment) created by gatk-bot
December 8, 2023 18:32 14s
December 8, 2023 18:32 14s
GenomicsDB on azure Build and Test GATK 4 #3504: Pull request #8438 synchronize by lbergelson
December 8, 2023 18:07 1h 4m 37s lb_genomicsdb_on_azure
lb_genomicsdb_on_azure
December 8, 2023 18:07 1h 4m 37s
Updated Python and PyMC, removed TensorFlow, and added PyTorch in conda environment. carrot-test-run-from-pr-comment #4589: Issue comment #8561 (comment) created by gatk-bot
December 8, 2023 17:17 13s
December 8, 2023 17:17 13s