ReblockGVCFs cleanup #2782

Job	Run time
build and push gatk docker to artifacts	7m 51s
build and push gatk docker to artifacts	34m 57s
Validate generated WDLs using womtools	15m 17s
Validate generated WDLs using womtools	15m 17s
Validate script WDLs using womtools	2m 8s
Validate script WDLs using womtools	2m 8s
check if the environment has privileges	1s
check if the environment has privileges	1s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	33m 21s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	33m 21s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	39m 52s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	39m 52s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	42m 59s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	42m 59s
WDL test RUN_M2_WDL on cromwell	31m 3s
WDL test RUN_M2_WDL on cromwell	31m 3s
WDL test RUN_CNN_WDL on cromwell	26m 7s
WDL test RUN_CNN_WDL on cromwell	26m 7s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	27m 5s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	27m 5s
Java 17.0.6+10 build and test cloud	17m 17s
Java 17.0.6+10 build and test cloud	17m 17s
Java 17.0.6+10 build and test integration	50m 13s
Java 17.0.6+10 build and test integration	50m 13s
Java 17.0.6+10 build and test unit	28m 53s
Java 17.0.6+10 build and test unit	28m 53s
Java ${{ matrix.Java }} test on docker ${{ matrix.testType }}	0s
Java 17.0.6+10 test on docker integration	47m 22s
Java 17.0.6+10 test on docker unit	37m 50s
Java 17.0.6+10 test on docker variantcalling	1h 2m 39s
Java 17.0.6+10 test on docker conda	45m 23s
	14h 24m 34s

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