Bug fix Github actions out of disk error #575
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Github runners currently have ~15 GB disk space, and we run out of disk when building some of the base Docker images, as it will result in rebuilding many derived images. This PR adds the
--prune-after-each-image
tobuild_docker
invocation to decrease disk usage. This flag was used in theTest Images Build
job but missing from thePublish
job, which is a bug.The inconsequential change on the
samtools-cloud/Dockerfile
is to trigger building and publishingsamtools-cloud
docker image and all the derived images since thePublish
job had failed on #574, and the images were not published.