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Update docker images list, triggered by e70dfbd
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@gatk-sv-bot
gatk-sv-bot committed Jul 28, 2023
1 parent e70dfbd commit 286a87f
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Showing 2 changed files with 22 additions and 22 deletions.
22 changes: 11 additions & 11 deletions inputs/values/dockers.json
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{
"name": "dockers",
"cnmops_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/cnmops:2023-02-01-v0.26.8-beta-9b25c72d",
"cnmops_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/cnmops:2023-07-28-v0.28.1-beta-e70dfbd7",
"condense_counts_docker": "us.gcr.io/broad-dsde-methods/tsharpe/gatk:4.2.6.1-57-g9e03432",
"gatk_docker": "us.gcr.io/broad-dsde-methods/markw/gatk:2023-07-13-4.4.0.0-43-gd79823f9c-NIGHTLY-SNAPSHOT",
"gatk_docker_pesr_override": "us.gcr.io/broad-dsde-methods/tsharpe/gatk:4.2.6.1-57-g9e03432",
Expand All @@ -9,16 +9,16 @@
"manta_docker": "us.gcr.io/broad-dsde-methods/vjalili/manta:5994670",
"melt_docker": "us.gcr.io/talkowski-sv-gnomad/melt:3159ce1",
"scramble_docker": "us.gcr.io/broad-dsde-methods/tsharpe/scramble:1.0.2",
"samtools_cloud_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/samtools-cloud:2023-02-01-v0.26.8-beta-9b25c72d",
"sv_base_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-base:2023-02-01-v0.26.8-beta-9b25c72d",
"samtools_cloud_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/samtools-cloud:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_base_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-base:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_base_mini_docker": "us.gcr.io/broad-dsde-methods/vjalili/sv-base-mini:5994670",
"sv_pipeline_base_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_hail_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_updates_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_qc_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_rdtest_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"wham_docker": "us.gcr.io/broad-dsde-methods/tsharpe/wham:f07f24a",
"sv_pipeline_base_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_hail_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_updates_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_qc_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_rdtest_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"wham_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/wham:2023-07-28-v0.28.1-beta-e70dfbd7",
"igv_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/igv:mw-xz-fixes-2-b1be6a9",
"duphold_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/duphold:mw-xz-fixes-2-b1be6a9",
"vapor_docker": "us.gcr.io/broad-dsde-methods/eph/vapor:header-hash-2fc8f12",
Expand All @@ -29,7 +29,7 @@
"sv-pipeline-virtual-env": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline-virtual-env:2023-05-15-v0.27.3-beta-a252f306",
"samtools-cloud-virtual-env": "us.gcr.io/broad-dsde-methods/vjalili/samtools-cloud-virtual-env:5994670",
"sv-utils-env": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-utils-env:2023-02-01-v0.26.8-beta-9b25c72d",
"sv_utils_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-utils:2023-03-16-v0.27-beta-906c6272",
"sv_utils_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-utils:2023-07-28-v0.28.1-beta-e70dfbd7",
"gq_recalibrator_docker": "us.gcr.io/broad-dsde-methods/markw/gatk:mw-tb-form-sv-filter-training-data-899360a",
"str": "us.gcr.io/broad-dsde-methods/gatk-sv/str:2023-05-23-v0.27.3-beta-e537bdd6"
}
22 changes: 11 additions & 11 deletions inputs/values/dockers_azure.json
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{
"name": "dockers",
"cnmops_docker": "vahid.azurecr.io/gatk-sv/cnmops:2023-02-01-v0.26.8-beta-9b25c72d",
"cnmops_docker": "vahid.azurecr.io/gatk-sv/cnmops:2023-07-28-v0.28.1-beta-e70dfbd7",
"condense_counts_docker": "vahid.azurecr.io/tsharpe/gatk:4.2.6.1-57-g9e03432",
"gatk_docker": "vahid.azurecr.io/markw/gatk:2023-07-13-4.4.0.0-43-gd79823f9c-NIGHTLY-SNAPSHOT",
"gatk_docker_pesr_override": "vahid.azurecr.io/tsharpe/gatk:4.2.6.1-57-g9e03432",
Expand All @@ -9,16 +9,16 @@
"manta_docker": "vahid.azurecr.io/vjalili/manta:5994670",
"melt_docker": "vahid.azurecr.io/melt:vj-4ff9de9f",
"scramble_docker": "vahid.azurecr.io/tsharpe/scramble:1.0.2",
"samtools_cloud_docker": "vahid.azurecr.io/gatk-sv/samtools-cloud:2023-02-01-v0.26.8-beta-9b25c72d",
"sv_base_docker": "vahid.azurecr.io/gatk-sv/sv-base:2023-02-01-v0.26.8-beta-9b25c72d",
"samtools_cloud_docker": "vahid.azurecr.io/gatk-sv/samtools-cloud:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_base_docker": "vahid.azurecr.io/gatk-sv/sv-base:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_base_mini_docker": "vahid.azurecr.io/vjalili/sv-base-mini:5994670",
"sv_pipeline_base_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_hail_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_updates_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_qc_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"sv_pipeline_rdtest_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-26-v0.28.1-beta-6ead40fc",
"wham_docker": "vahid.azurecr.io/vjalili/wham:5994670",
"sv_pipeline_base_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_hail_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_updates_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_qc_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"sv_pipeline_rdtest_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2023-07-28-v0.28.1-beta-e70dfbd7",
"wham_docker": "vahid.azurecr.io/gatk-sv/wham:2023-07-28-v0.28.1-beta-e70dfbd7",
"igv_docker": "vahid.azurecr.io/gatk-sv/igv:mw-xz-fixes-2-b1be6a9",
"duphold_docker": "vahid.azurecr.io/gatk-sv/duphold:mw-xz-fixes-2-b1be6a9",
"vapor_docker": "vahid.azurecr.io/eph/vapor:header-hash-2fc8f12",
Expand All @@ -29,7 +29,7 @@
"sv-pipeline-virtual-env": "vahid.azurecr.io/gatk-sv/sv-pipeline-virtual-env:2023-05-15-v0.27.3-beta-a252f306",
"samtools-cloud-virtual-env": "vahid.azurecr.io/vjalili/samtools-cloud-virtual-env:5994670",
"sv-utils-env": "vahid.azurecr.io/gatk-sv/sv-utils-env:2023-02-01-v0.26.8-beta-9b25c72d",
"sv_utils_docker": "vahid.azurecr.io/gatk-sv/sv-utils:2023-03-16-v0.27-beta-906c6272",
"sv_utils_docker": "vahid.azurecr.io/gatk-sv/sv-utils:2023-07-28-v0.28.1-beta-e70dfbd7",
"gq_recalibrator_docker": "vahid.azurecr.io/markw/gatk:mw-tb-form-sv-filter-training-data-899360a",
"str": "vahid.azurecr.io/gatk-sv/str:2023-05-23-v0.27.3-beta-e537bdd6"
}

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