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2.13.1
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@d-cameron d-cameron released this 23 Dec 09:21
· 23 commits to master since this release
v2.13.1
0551d98

Bug fix release

  • #550 not redirecting stderr when checking samtools version so samtools library errors aren't swallowed
  • #551 passing picard options (such as VALIDATION_STRINGENCY) to all gridss steps
  • #553 Only building in-process bwa index if it's actually going to be used
  • #554 virusbreakend auto-generating GRIDSS reference files for the host reference

Docker changes:

  • Dropped gridss/gridss_minimal docker image support
  • #535 added makeblastdb to image
  • #549 using samtools 1.14
  • Docker image generation now part of CI
  • Added github action to publish docker image upon release creation

Special thanks to @keiranmraine, @scwatts and @lkhilton for bugfix code contributions

Contributors

scwatts, keiranmraine, and lkhilton
Assets 16
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