Skip to content
@JuliaEpi

Julia Epi

Computational epidemiology in @JuliaLang.

Julia Epi

Gmail Twitter Mastodon Mastodon YouTube

We're building an open research community to develop an epidemiological modelling ecosystem written in Julia for the design, management, wrangling and quality assessment of multiple data types and sources and the parameterisation, calibration, validation, simulation and emulation of multiple classes of epidemiological models aimed at tackling typical problems such as situational awareness, nowcasting projection and evaluation, forecasting projection and evaluation, prospective and retrospective scenario analysis to ultimately support the preparedness, surveillance, response, control and prevention of outbreaks, epidemics and pandemics.

Current Projects

Please check the organisation-level discussions for current projects or project ideas.

Contact Us

Are you an epi/eco/stat/ML modeller or data scientist/manager?

Would you be interested in joining us to collaborate on the management and wrangling of data, the translation of past/present project-specific or package code into Julia, the conceptualization of new research projects, the open development and maintenance of new packages, offering and receiving expert feedback though issues, discussions and the whole lot of open source research communities?

Then please contact us and let us know

  • if you're interested to offer your contribution or you know students/researchers/developers who might be interested in collaborating;
  • if you believe you could transfer some of your relevant repositories to JuliaEpi.

Announcements

Pinned Loading

  1. COVID19-Italy-Integrated-Surveillance-Data COVID19-Italy-Integrated-Surveillance-Data Public

    Forked from InPhyT/COVID19-Italy-Integrated-Surveillance-Data

    COVID-19 integrated surveillance data provided by the Italian Institute of Health and deconvolved via UnrollingAverages.jl.

    Julia 1

  2. COVID-19_Piedmont COVID-19_Piedmont Public

    Forked from UniTo-SEPI/COVID-19_Piedmont

    COVID-19 Surveillance Data Modelling and Management Pipeline in Piedmont.

    Julia

  3. RSV-seasonality-public RSV-seasonality-public Public

    Julia 1

  4. kenya-covid-three-waves kenya-covid-three-waves Public

    Forked from SamuelBrand1/kenya-covid-three-waves

    Model supporting "COVID-19 Transmission Dynamics Underlying Epidemic Waves in Kenya"

    Julia 1

  5. monkeypox_UK monkeypox_UK Public

    Forked from SamuelBrand1/MonkeypoxUK

    Some code for monkeypox

    Julia 1

  6. monkeypox_heavytail monkeypox_heavytail Public

    Forked from akira-endo/monkeypox_heavytail

    Underlying code for Endo et al. "Heavy-tailed sexual contact networks and the epidemiology of monkeypox outbreak in non-endemic regions, May 2022."

    Julia

Repositories

Showing 10 of 115 repositories