patch output fasta rename

Joon-Klaps · Aug 5, 2024 · 62c24a8 · 62c24a8
1 parent 0cbf931
commit 62c24a8
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/conf/modules.config b/conf/modules.config
@@ -1545,7 +1545,7 @@ process {
                     "${params.outdir}/consensus/seq/${meta.sample}" :
                     "${params.outdir}/assembly/polishing/iterations/${meta.step}/consensus/seq/${meta.sample}" },
                     mode: params.publish_dir_mode,
-                    pattern: "*.fa",
+                    pattern: "*.fasta",
                     saveAs: { filename -> params.prefix || params.global_prefix  ? "${params.global_prefix}-$filename" : filename }
                 ]
             ]
@@ -1557,7 +1557,7 @@ process {
         publishDir = [
             path: { "${params.outdir}/consensus/" },
             mode: params.publish_dir_mode,
-            pattern: "*.fa",
+            pattern: "*.fasta",
             enabled: false
         ]
     }