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Final version of the slides
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IgorTatarnikov committed Nov 8, 2023
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Expand Up @@ -73,23 +73,14 @@ Tyson, A. L.*, Vélez-Fort, M.*, Rousseau, C. V.*, Cossell, L., Tsitoura, C., Ob

![](img/2D_Example3.png){.absolute left=0 right=0 bottom=0 top=0 style="margin: auto auto;"}

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## Motivation
::: {style="margin-top: 80px"}
* Axioscan slide scanner
* Need pipeline for this data
* Show some images from Axioscan
* Mention the serial section 2-photon microscopes and how people use them because they're "easy"
:::
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## Scientific Requirements

::: {style="margin-top: 80px"}
* 2D sections (any orientation, inc some damage)
* Whole brains
* Thick sections (e.g. from tissue clearing, acute recordings)
* Small blocks (e.g. from tissue clearing or expansion microscopy)
* Register:
* 2D sections (any orientation, inc some damage)
* Whole brains
* Thick sections (e.g. from tissue clearing, acute recordings)
* Small blocks (e.g. from tissue clearing or expansion microscopy)
:::

## Tech Requirements
Expand All @@ -114,14 +105,6 @@ Tyson, A. L.*, Vélez-Fort, M.*, Rousseau, C. V.*, Cossell, L., Tsitoura, C., Ob
* Demo Time!
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## Current holdups

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* Premature optimisation
* Start time for DefaultParameterObject in itk
* Dealing with C++ objects in Python
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## Future plans

::: {style="margin-top: 80px;"}
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