Skip to content

v0.11.0
Compare
Choose a tag to compare
@garrettwrong garrettwrong released this 27 Apr 16:56
v0.11.0
4d8a136
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Learn about vigilant mode.

ASPIRE v0.11.0 is minor release, adding several scientific and API changes.

This release provides the following features:

  • Extensible ClassAvgSource framework
  • Ab-initio modeling for Cn symmetry (CLSymmetryCn)
  • FLE Basis (FLEBasis2d)
  • IndexedSource for source slicing and remapping
  • Immutable source API migration
  • Image and Volume API cleanup (return types)
  • asnumpy as immutable views
  • Additional RELION 3.1 STAR file support
  • SNR Estimation and Simulation utilities
  • Improved whiten syntax
  • Immutable Source API

Documentation and Logging:

  • Tutorial Gallery restructuring
  • Lecture Feature Demo updates
  • Class Averaging API documentation and UML
  • Introductory API documentation and UML (gallery)
  • Continued filtering of log messages
  • CTF forward model validation and tutorial

Bug fixes:

  • Redundant Image conversion bug in denoised_src
  • Fixed eval_coords clustering (adjusted Rand score)
  • Negative Image index slicing (wraparound bug)
  • Polar Fourier Row Major cleanup

Systems/CI Updates:

  • conda BLAS accelerated numerical backends (mkl, openblas, accelerate)
  • Relaxed pip version requirements
  • Long running test suite on review-ready
  • CI documentation and gallery build on push
  • Windows CI patches
  • Resolve deprecation warnings (pandas, scipy)
  • Partial removal of parameterized_class
  • black 23.1.0 updates
Assets 2
Loading