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@garrettwrong garrettwrong released this 27 Oct 19:47
v0.10.0
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ASPIRE v0.10.0 is large release adding a wide range of features and fixes.

This release provides the following features:

  • Common Lines Method for C3/C4 Symmetry (CLSymmetryC3C4, experimental)
  • Image Accessor API for ImageSource
  • Parallelized BFSReddyChatterjiAverager2D and ReddyChatterjiAverager2D class averaging image aligners
  • Support Nonsequential ImageSource.images
  • Improved RIRClass2D batching
  • crop_pad_3d
  • Replace 2D Downsample algorithm (includes 1-pixel scaling bugfix)
  • ClassSelector API and RandomClassSelector (now randomized as default)
  • gaussian_* helper functions
  • Filter.sign method
  • Integrate CTF estimator with CoordinateSource

Bug fixes:

  • Improved dtype passthrough
  • Volume.flip default axis change
  • Rectangular micrograph axes
  • Fix crash in BatchedRotCov2D when invoked without CTF details
  • Volume.dtype mismatches and checks

Systems/CI Updates:

  • Refresh Azure pipeline Ubuntu images
  • Deprecate Azure OSX 10.15 CI in favor of OSX 11

Cleanup and Documentation Updates:

  • Logical (F)FBBasis3D tests
  • Documentation format cleanup (fixes broken parsing)
  • Top level submodule imports (API improvement)
  • .rots ~> .rotations attribute cleanup
  • 3D Downsampling cleanup
  • Improved Getting Started page
  • Improved Gallery Tutorials and Experiments examples
  • Sphinx language patch
  • Implement lower bound checks for FSPCA components
  • Fourier-Bessel Mixin class (FBBasisMixin)
  • Resolve PIL package deprecations
  • Update ComplexPCA scikit workaround for upstream releases
  • Improve evaluate and evaluate_t API standards
  • Improve Zenodo affiliation integration
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