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mockup.html
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title>Distributome.org</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<link type="text/css" href="mockup.css" rel="stylesheet" />
<script type="text/javascript" src="./scripts/jquery.js"></script>
<script type="text/javascript" src="scripts/protovis-r3.2.js"></script>
<!-- Adding bibtex script after jQuery script -->
<script type="text/javascript" src="scripts/bibtex_js.js"></script>
<script type="text/javascript" src="scripts/xml2json.js"></script>
<script type="text/javascript" src="scripts/common.js"></script>
<script type="text/javascript" src="scripts/editor.js"></script>
<script type="text/javascript" src="scripts/splitter.js"></script>
<script type="text/javascript" src="scripts/XMLWriter.js"></script>
<script type="text/javascript" src="scripts/distributome.js"></script>
<!--[if !IE7]>
<style type="text/css">
#wrap{ display:table; height: 100%}
</style>
<![endif]-->
<script type = "text/javascript">
$(document).ready(function(){
// NAVIGATOR //
// Adjusts the size of the navigator according
// to browser size on page load
//future: adjust navigator as browser is resized
var contentW = $('.content').width() - $('.sidebar').width() - 20;
var contentH = $('.content').height() - $('.footer').height() + 5;
$('#LeftPanel').css('width', contentW);
$('#LeftPanel').css('height', contentH);
// Adjust Sidebar Height according to
// browser height
$('.sidebar').css('max-height', contentH);
var $body = $('body');
function resize(){
if( $(window).width() <= 800 ){
$('.styled select').css('font-size', '0.8em');
$('.mainmenu li').css('font-size', '0.8em');
$('.mainmenu li').css('margin', '0 10px 0 0');
$('.mainmenu #home').css('font-size', '1em');
$('.mainmenu #home').css('padding', '0px 40px 0px 20px');
$('.header').css('height', '35px');
$('.accordion h3').css('font-size', '0.8em');
$('.mainmenu li ul.subnav').css('top', '25px');
$('.mainmenu li ul.subnav').css('width', '100px');
$('.mainmenu li ul.subnav li').css('width', '100px');
$('.mainmenu li ul.subnav li').css('height', '15px');
$('.footer').css('height', '35px');
$('.footer ul li').css('padding', '5px 0');
//alert('resized');
}
else{
$('.styled select').css('font-size', '0.9em');
$('.mainmenu li').css('font-size', '1em');
//$('.mainmenu li').css('margin', '5px 16px 0 0');
$('.mainmenu #home').css('font-size', '1.5em');
$('.mainmenu #home').css('padding', '0px 60px 0px 27px');
$('.header').css('height', '45px');
$('.accordion h3').css('font-size', '1.0em');
$('.footer').css('height', '45px');
$('.footer ul li').css('padding', '10px 0');
/*
$('.mainmenu li ul.subnav').css('top', '31px');
$('.mainmenu li ul.subnav').css('width', '199px');
$('.mainmenu li ul.subnav li').css('width', '150px');
$('.mainmenu li ul.subnav li').css('height', '22px');
*/
}
};
// resize Timer prevents browser from calling resize() repeatedly
var resizeTimer;
$(window).resize(function() {
clearTimeout(resizeTimer);
resizeTimer = setTimeout( resize, 100 );
});
resize();
// Dropdown Menu //
$("ul.subnav").parent().append("<span></span>");
$(".mainmenu li").hover(function(){
$(this).find("ul.subnav").slideDown('fast').show();
$(this).hover(function(){
}, function(){
$(this).find("ul.subnav").slideUp('fast');
});
}).hover(function() {
$(this).addClass("subhover");
}, function(){
$(this).removeClass("subhover");
});
// Sidebar //
// implements accordion functionality: all panels start hidden
// currently, only one panel is allowed to be open at a time.
$('.accordion:eq(0)> div').hide();
$('.accordion:eq(0)> h3').click(function() {
var old=$('.active');
old.toggleClass('active');
old.next().slideToggle('fast');
$(this).next().slideToggle('fast');
$(this).toggleClass('active');
});
});
// BODY FUNCTION //
function isKeyPressed(event){
if (event.shiftKey==1) {
_shiftKey = true;
}else{
_shiftKey = false;
}
}
// SITE TRACKER //
var sc_project=5714596;
var sc_invisible=1;
var sc_partition=71;
var sc_click_stat=1;
var sc_security="038e9ac4";
</script>
<!-- LATEX / TYPESETTING CODE-->
<script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<script>
MathJax.Hub.Config({
TeX: {
Macros: {
sgn: '{\\text{sgn}}' ,
// \newcommand{\sgn}{\text{sgn}} ,
sech: '{\\text{sech}}' ,
erf: '{\\text{erf}}' ,
bs: ['{\\boldsymbol #1}',1]
}
}
});
</script>
<script type="text/x-mathjax-config">
MathJax.Hub.Config({
extensions: ["tex2jax.js"],
jax: ["input/TeX","output/HTML-CSS"],
tex2jax: {inlineMath: [["$","$"],["\\(","\\)"]]}
});
</script>
<!-- NAVIGATOR FUNCTIONS -->
<script type="text/javascript+protovis">
/**
Bottom Toolbar Functions
Enables Functionality of the menus and the restart/reset/pause buttons
**/
function resetNavigator(){
resetView();
resetNodesEdges();
vis.render();
}
function resetNodesEdges(){
resetNodes();
resetEdges();
}
function resetNodes(){
var classes = pv.nodes(distributome.nodes);
classes.slice(1).forEach(function(d) {
var i = 5;
d.nodeValue.selected = false;
d.nodeValue = d.nodeValue.value;
if (isNaN(d.x)) d.x = w / 2 + 40 * Math.random() - 20;
if (isNaN(d.y)) d.y = h / 2 + 40 * Math.random() - 20;
});
}
function resetEdges(){
var classes = pv.nodes(distributome.edges);
classes.slice(1).forEach(function(d) {
d.nodeValue.selected = false;
});
}
function getSelectedNodes(){
var classes = pv.nodes(distributome.nodes);
var selectedNodes = new Array();
classes.slice(1).forEach(function(d) {
if(d.nodeValue.selected == 'red'){
selectedNodes.push(getDistributionName(d.nodeValue.nodeName));
}
});
return selectedNodes;
}
function graphPause(){
force.stop();
}
function graphRestart(){
force.start();
}
function resizeDistributome(){
force.nodes(distributome.nodes);
force.reset();
var leftPanelWidth = document.getElementById('LeftPanel').style.width;
var leftPanelHeight = document.getElementById('LeftPanel').style.height;
var w = leftPanelWidth.substring(0,leftPanelWidth.indexOf('px')),
h = leftPanelHeight.substring(0,leftPanelHeight.indexOf('px'));
vis.width(w);
vis.height(h);
vis.render();
graphPause();
}
</script>
</head>
<body onmousedown="isKeyPressed(event)">
<!-- Footer HTML -->
<!-- Toolbar code taken from client's original html file -->
<div class="footer">
<ul id="toolbar">
<li>
<input id="distributome.text" name="search" type="text" onKeydown="Javascript: if (event.keyCode==13) textSearch();" placeholder="Find distributions or relations"/>
</li>
<li>
<div class="styled">
<form action="NeughborAction">
<select name="Neighbors" id="distributome.neighborAction" onchange="neighborsFetch();">
<option value="neighbors">Neighbors</option>
<option value="parent">Parents</option>
<option value="children">Children</option>
<option value="parentchildren">Parents&Children</option>
</select>
</form>
</div>
</li>
<li>
<div class="styled">
<form action="NodeTypeAction">
<select name="NodeType" id="distributome.nodeTypeAction" onchange="nodeTypeInfoFetch();">
<option value="distributionType">Distribution Type</option>
<option value="convolution">Convolution</option>
<option value="memoryless">Memoryless</option>
<option value="inverse">Inverse</option>
<option value="linearCombination">Linear Combination</option>
<option value="maximum">Maximum</option>
<option value="minimum">Minimum</option>
<option value="discrete">Discrete</option>
<option value="continuous">Continuous</option>
</select>
</form>
</div>
</li>
<li>
<div class="styled">
<form action="EdgeTypeAction">
<!-- Get the type of an edge (relation) and highlight all edges of this type.
Note that all edges are directional!
-->
<select name="EdgeType" id="distributome.edgeTypeAction" onchange="edgeTypeInfoFetch();">
<option value="relationType">Relation Type</option>
<option value="special case">Special Case</option>
<option value="transform">Transform</option>
<option value="limiting">Limiting</option>
<option value="transformation">Transformation</option>
<option value="bayesian">Bayesian</option>
</select>
</form>
<div>
</li>
<li>
<div class="styled">
<form action="ConnectedNodesAction">
<select name="ConnectedNodes" id="distributome.connectedNodesAction" onchange="resetView();connectedNodesFetch();">
<option value="connectivity">Display Ontology</option>
<option value="mostConnected">Top Level</option>
<option value="connected">Middle Level</option>
<option value="sparselyConnected">All</option>
</select>
</form>
</div>
</li>
<li>
<button type="button" class="button" tabindex="4" title="Reset View" onclick="resetPage();">RESET</button>
</li>
<li>
<button type="button" class="button" tabindex="4" title="Restart View" onclick="graphRestart();">RESTART</button>
</li>
<li>
<button type="button" class="button" tabindex="4" title="Pause View" onclick="graphPause();">PAUSE</button>
</li>
</ul>
</div>
<div id="wrap">
<div class="header">
<!-- TOP MENU CODE -->
<ul class = "mainmenu">
<!-- to add a new menu item: insert a new <li><a href="link to content">MenuItemName</a></li>
<ul class="subnav"> </ul> indicates that the <li> objects within are
part of the submenu -->
<li id = "home"><a href="index.html">Distributome</a></li>
<li><a href="#">About</a>
<ul class="subnav">
<li><a href="http://www.distributome.org/about.html"> Project</a></li>
<li><a href="http://wiki.stat.ucla.edu/distributome/index.php/Main_Page"> Document Wiki</a></li>
<li><a href="https://code.google.com/p/distributome/"> Documentation</a></li>
</ul>
</li>
<li><a href="http://www.distributome.org/meetings/">Events</a>
</li>
<li><a href="http://www.distributome.org/docs.html">Tech Docs</a>
</li>
<li><a href="#">Legacy Resources</a>
<ul class="subnav">
<li><a href="http://www.distributome.org/jars/distributome.xml"> legacy XML</a></li>
<li><a href="http://www.distributome.org/jars/distributome.xsd"> legacy XSD</a></li>
</ul>
</li>
<li><a href="#">External Links</a>
<ul class="subnav">
<li><a href="http://www.socr.ucla.edu/"> SOCR</a></li>
<li><a href="http://www.math.uah.edu/stat/"> VLPS</a></li>
<li><a href="http://mbi.osu.edu/"> OSU Bioscience</a></li>
</ul>
</li>
<li><a href="http://distributome.org/blog/?cat=4">Activities</a>
</li>
<li><a href="http://distributome.org/blog/">Blog</a>
</li>
</ul>
</div>
<div class = "content">
<div id="LeftPanel" style="width:500px; height:500px" >
<script type="text/javascript+protovis">
/**
Protovis Code that Renders the Navigator
***/
try{
var leftPanelWidth = document.getElementById('LeftPanel').style.width;
var leftPanelHeight = document.getElementById('LeftPanel').style.height;
var w = leftPanelWidth.substring(0,leftPanelWidth.indexOf('px')),
h = leftPanelHeight.substring(0,leftPanelHeight.indexOf('px')),
colors = pv.Colors.category10();
var vis = new pv.Panel()
.width(w)
.height(h)
.fillStyle("white") //.fillStyle("rgb(240,240,240)")
//.event("mousedown", pv.Behavior.pan().bound(true))
//.event("mousewheel", pv.Behavior.zoom().bound(true));
.event("mousedown", pv.Behavior.pan())
.event("mousewheel", pv.Behavior.zoom());
/*** To Do: Need to trigger a Split-Frame Resizing when the mouse-scroll
zoom action is triggered. See the split-pane resizing functionality
below ($("#MainSplitPaneObject").trigger("resize");). Something like:
.event("mousewheel", graphZoomResizeFrame());
Currently, the graph-zoom expands the frame, but leaves the split-pane
size unchanged!
****/
force = vis.add(pv.Layout.Force)
.nodes(distributome.nodes)
.links(distributome.edges)
.springConstant(0.05)
.chargeConstant(-80)
.springLength(200)
.bound(true);
var linky = force.link.add(pv.Line)
.cursor("pointer")
//.fillStyle("#696969")
.strokeStyle(function(d,l) getLinkColor(d,l))
.event("click", function (d, l) { getRelationProperties(d.nodeName, l.index); setEditorNode(l.index, "link"); });
linky.add(pv.Dot)
.data(function(l) { if(l.target == l.source) return [{x:0,y:0}];
nodecalc = Math.sqrt((l.targetNode.linkDegree*15)/Math.PI)*2;
return [{
x: l.targetNode.x - nodecalc * Math.cos(Math.atan2(l.targetNode.y - l.sourceNode.y, l.targetNode.x - l.sourceNode.x)),
y: l.targetNode.y - nodecalc * Math.sin(Math.atan2(l.targetNode.y - l.sourceNode.y, l.targetNode.x - l.sourceNode.x))
}];
})
.angle(function (n,l) Math.atan2(l.targetNode.y - l.sourceNode.y, l.targetNode.x - l.sourceNode.x) - Math.PI/2)
.shape("triangle")
.strokeStyle(function(d,l) getArrowColor(d,l))
.fillStyle(function(d,l) getArrowColor(d,l))
.size( function(d,l) getArrowSize(d,l))
.visible(true);
var dnodes = force.node.add(pv.Dot)
.bottom(0)
.size(function(d) { return d.selected?(d.linkDegree + 15) * Math.pow(this.scale, -1.5):(d.linkDegree + 4) * Math.pow(this.scale, -1.5)})
.fillStyle(function(d) getColor(d))
//.fillStyle(pv.hsl(225, 0.5, 0.5, 0.5))
.strokeStyle(function() this.fillStyle().darker())
.lineWidth(1)
//.title(function(d) d.nodeName)
.cursor("pointer")
.event("click", function (d) { getNodeProperties(this.index, d.nodeName, d); setEditorNode(this.index, "node"); })
.event("mousedown", pv.Behavior.drag())
.event("drag", force)
.anchor("center").add(pv.Label)
.text(function(d) getText(d) )
.font(function(d) d.selected?'bold 10pt sans-serif':'normal 7pt sans-serif');
/*dnodes.add(pv.Color)
.color('#ddd')
.opacity(1);*/
vis.render();
}catch(e){
}
//setDropDownSelectedValue('distributome.connectedNodesAction', 1);
//connectedNodesFetch();
</script>
</div>
<!-- SIDEBAR CODE -->
<div id="navsidebar" class="sidebar">
<!-- ACCORDION -->
<!-- to add a new panel, simply add a new <h3> NEW PANEL TITLE </h3>
followed by <div> PANEL CONTENT </div> -->
<div class = "accordion">
<h3>Editor</h3>
<div id="editor" >
<div id="editorTitle" ></div>
<div id="contentHolder" >
<div id="editorContent" >
<button id="createDis" >Create a new distribution</button>
<button id="createRel" >Create a new Relation</button>
<div id="editorNote" >
<p>
Click on an existing distribution or relation in the navigator to edit it.
</p>
</div>
</div>
<div id="addAttrDiv" >
<div id="addAttrTitle" >
Choose an attribute
</div>
<div id="disAttr" >
<div class="attrChoice" >
Name
</div>
<div class="attrChoice" >
Type
</div>
<div class="attrChoice" >
Model
</div>
<div class="attrChoice" >
Support
</div>
<div class="attrChoice" >
Pdf
</div>
<div class="attrChoice" >
Mode
</div>
<div class="attrChoice" >
Cdf
</div>
<div class="attrChoice" >
Qf
</div>
<div class="attrChoice" >
Mean
</div>
<div class="attrChoice" >
Variance
</div>
<div class="attrChoice" >
Skew
</div>
<div class="attrChoice" >
Kurt
</div>
<div class="attrChoice" >
Median
</div>
<div class="attrChoice" >
Q1
</div>
<div class="attrChoice" >
Q3
</div>
<div class="attrChoice" >
History
</div>
<div class="attrChoice" >
Id
</div>
</div>
<div id="relAttr" >
<div class="attrChoice" >
To
</div>
<div class="attrChoice" >
From
</div>
<div class="attrChoice" >
Statement
</div>
<div class="attrChoice" >
Type
</div>
<div class="attrChoice" >
Id
</div>
</div>
</div>
</div>
<div id="editorFooter">
</div>
</div>
<h3>Distribution Properties</h3>
<div id="distributome.propertiesPannel"> <!-- Get the Inter-Distribution Relation Properties from Distributome.xml -->
</div>
<h3>Distribution Actions</h3>
<div>
<ul>
<li><a href="./calc/NormalCalculator.html" target="_blank" title="Interactive Distribution Calculator" id="distributome.calculator">Calculator</a></li>
<li><a href="./exp/PoissonExperiment.html" target="_blank" title="Run Virtual Distribution Experiment" id="distributome.experiment">Experiment</a></li>
<li><a href="./sim/NormalSimulation.html" target="_blank" title="Distribution Sampling and Simulation" id="distributome.simulation">Simulation</a></li>
<li><a href="./Distributome.xml.html" target="_blank" title="Render the entire Distributome Database as a web-page">Distributome DB HTML View</a></li>
</ul>
</div>
<h3>Inter-Distribution Relations</h3>
<div id="distributome.relationPannel">
</div>
<h3>Distribution References</h3>
<!-- <div id="distributome.referencePanel" style="display:none"> </div> -->
<div id="bibtex_display"></div>
</div>
</div>
</div>
</div>
</body>
</html>