From 67c7a1122eef0d4c187a2e6f574b63f368aa0323 Mon Sep 17 00:00:00 2001 From: y1zhou Date: Thu, 20 Oct 2022 22:18:22 +0800 Subject: [PATCH] docs: update package version and readme --- README.rst | 3 +++ metabolike/__init__.py | 2 +- 2 files changed, 4 insertions(+), 1 deletion(-) diff --git a/README.rst b/README.rst index 3258b4c..41770e2 100644 --- a/README.rst +++ b/README.rst @@ -28,10 +28,13 @@ Metabolic reprogramming Knowledgebase A Python package that aggregates the data from BRENDA_ and BioCyc_ into one unified `graph database`_. The MetaCyc (BioCyc) database is imported to a graph database using the provided SBML file and various ``.dat`` files. +A `Streamlit`_ app is `included in the code`_ for easy route search with both example TCGA datasets and custom CSV files. .. _BRENDA: https://brenda-enzymes.org/ .. _BioCyc: https://biocyc.org/ .. _graph database: https://neo4j.com/ +.. _Streamlit: https://streamlit.io/ +.. _included in the code: https://github.com/y1zhou/metabolike/blob/main/metabolike/api/main.py To-Do ----- diff --git a/metabolike/__init__.py b/metabolike/__init__.py index c5ebb3c..bc6a7c7 100644 --- a/metabolike/__init__.py +++ b/metabolike/__init__.py @@ -1,4 +1,4 @@ """ Build graph database from BRENDA and BioCyc for studying reprogrammed metabolisms. """ -__version__ = "0.4.1" +__version__ = "0.5.0"