diff --git a/src/ontology/imports/merged_import.owl b/src/ontology/imports/merged_import.owl index 5a0377b4..c74ba0ab 100644 --- a/src/ontology/imports/merged_import.owl +++ b/src/ontology/imports/merged_import.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-09-06") + +Annotation(owl:versionInfo "2024-09-11") Declaration(Class()) Declaration(Class()) @@ -29482,6 +29482,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -35336,6 +35337,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -41607,6 +41609,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -55377,7 +55380,7 @@ AnnotationAssertion(rdfs:label "caus SubObjectPropertyOf( ) SubObjectPropertyOf( ) -# Object Property: (disease causes disruption of) +# Object Property: (disease disrupts) AnnotationAssertion( "A relationship between a disease and a process where the disease process disrupts the execution of the process.") AnnotationAssertion(rdfs:label "disease causes disruption of") @@ -269394,6 +269397,12 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "plexin-A4") SubClassOf( ) +# Class: (plexin-B1) + +AnnotationAssertion(rdfs:comment "Category=gene.") +AnnotationAssertion(rdfs:label "plexin-B1") +SubClassOf( ) + # Class: (plexin-B3) AnnotationAssertion(rdfs:comment "Category=gene.") @@ -314010,6 +314019,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (plexin-B1 (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "plexin-B1 (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -370406,6 +370424,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (plexin-B1 (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "plexin-B1 (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (IgLON family member 5 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") diff --git a/src/patterns/data/default/entity_attribute_location.tsv b/src/patterns/data/default/entity_attribute_location.tsv index 01195c48..d7fba5b9 100644 --- a/src/patterns/data/default/entity_attribute_location.tsv +++ b/src/patterns/data/default/entity_attribute_location.tsv @@ -7055,3 +7055,4 @@ OBA:2051958 level of lymphocyte antigen 75 isoform 4 and LY75-CD302 fusion isofo OBA:2051959 level of neuroendocrine secretory protein 55 isoform Nesp55 (human) in blood PR:O95467-1 neuroendocrine secretory protein 55 isoform Nesp55 (human) PATO:0000070 amount UBERON:0000178 blood PMID:37794183 https://orcid.org/0000-0001-6757-4744 OBA:2051960 level of immunoglobulin lambda constant 2 (human) in blood PR:P0DOY2 immunoglobulin lambda constant 2 (human) PATO:0000070 amount UBERON:0000178 blood PMID:37794183 https://orcid.org/0000-0001-6757-4744 OBA:2051961 level of progesterone-induced-blocking factor 1 (human) in blood PR:Q8WXW3 progesterone-induced-blocking factor 1 (human) PATO:0000070 amount UBERON:0000178 blood PMID:37794183 https://orcid.org/0000-0001-6757-4744 +OBA:2051962 level of plexin-B1 in blood PR:000012896 plexin-B1 PATO:0000070 amount UBERON:0000178 blood PMID:34857772 https://orcid.org/0000-0001-6757-4744 diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index ab8bc277..d1c59a4c 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-09-09") + +Annotation(owl:versionInfo "2024-09-12") Declaration(Class()) Declaration(Class()) @@ -14192,6 +14192,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -20227,6 +20228,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -121479,6 +121481,15 @@ AnnotationAssertion(Annotation( "level of progesterone-induced-blocking factor 1 (human) in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) +# Class: (level of plexin-B1 in blood) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a plexin-B1 when measured in blood.") +AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") +AnnotationAssertion( "PMID:34857772") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood plexin-B1 amount") +AnnotationAssertion(rdfs:label "level of plexin-B1 in blood") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) + # Class: (aggressive behavior towards inanimate objects rate) AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a aggressive behavior towards inanimate objects.")