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11-topic.Rmd
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11-topic.Rmd
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# Advanced & Miscellaneous Topics
This covers advanced or miscellaneous topics in `rxode2`
## Covariates in rxode2
```{r topicCov, echo=FALSE, results='asis'}
cat(gsub("(^|\n) *(#+) +", "\\1##\\2 ",
unlist(knitr::knit_child(text = readLines("rxode2/man-roxygen/rmdhunks/covariates.Rmd"),
envir = environment(), quiet = TRUE))), sep="\n")
```
## Shiny and rxode2
```{r topicShiny, echo=FALSE, results='asis'}
cat(gsub("(^|\n) *(#+) +", "\\1##\\2 ",
unlist(knitr::knit_child(text = readLines("rxode2/man-roxygen/rmdhunks/shiny.Rmd"),
envir = environment(), quiet = TRUE))), sep="\n")
```
## Using rxode2 with a pipeline
```{r topicPipeline, echo=FALSE, results='asis'}
cat(gsub("(^|\n) *(#+) +", "\\1##\\2 ",
unlist(knitr::knit_child(text = readLines("rxode2/man-roxygen/rmdhunks/pipeline.Rmdh"),
envir = environment(), quiet = TRUE))), sep="\n")
```
## Speeding up rxode2
```{r topicSpeed, echo=FALSE, results='asis'}
cat(gsub("(^|\n) *(#+) +", "\\1##\\2 ",
unlist(knitr::knit_child(text = readLines("rxode2/man-roxygen/rmdhunks/speed.Rmdh"),
envir = environment(), quiet = TRUE))), sep="\n")
```
## Integrating rxode2 models in your package
```{r topicPkg, echo=FALSE, results='asis'}
cat(gsub("(^|\n) *(#+) +", "\\1##\\2 ",
unlist(knitr::knit_child(text = readLines("rxode2/man-roxygen/rmdhunks/packages.Rmdh"),
envir = environment(), quiet = TRUE))), sep="\n")
```
## Stiff ODEs with Jacobian Specification
```{r topicStiff, echo=FALSE, results='asis'}
cat(gsub("(^|\n) *(#+) +", "\\1###\\2 ",
unlist(knitr::knit_child(text = readLines("rxode2/man-roxygen/rmdhunks/stiff.Rmdh"),
envir = environment(), quiet = TRUE))), sep="\n")
```