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New Task: Outstanding datasets to add to MBON Data Portal #85

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MathewBiddle opened this issue Jun 12, 2024 · 0 comments
Open

New Task: Outstanding datasets to add to MBON Data Portal #85

MathewBiddle opened this issue Jun 12, 2024 · 0 comments
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dataset Dataset that needs to be mobilized MBON Data Portal MBON Issues relating to the Marine Biodiversity Observation Network User Request Requests for things from users

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@MathewBiddle
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Who is requesting this?

various Regional Asssociations

What is being requested?

Identified datasets to be ingested into the MBON data portal include:

  1. SCCOOS
    1. https://obis.org/dataset/c9aaa0e9-8f6c-4553-a014-a857baba0680
    2. non-DwC'd HABs data for California is available via the SCCOOS ERDDAP at https://erddap.sccoos.org/erddap/info/index.html?page=1&itemsPerPage=1000
  2. PacIOOS
    1. https://www1.usgs.gov/obis-usa/ipt/resource?r=ncrmp_nspc_fish_pacific
    2. https://www1.usgs.gov/obis-usa/ipt/resource?r=ncrmp_blt_fish_pacific
    3. https://www1.usgs.gov/obis-usa/ipt/resource?r=pifsc_spc_fish_pacific
    4. https://www1.usgs.gov/obis-usa/ipt/resource?r=noaa_micronesia_reef_monitoring_invert
    5. https://www1.usgs.gov/obis-usa/ipt/resource?r=noaa_micronesia_reef_monitoring_fish
    6. https://www1.usgs.gov/obis-usa/ipt/resource?r=noaa_micronesia_reef_monitoring_benthic
  3. CariCOOS
    1. We are currently working to align 3 datasets with Darwin Core and update the Puerto Rico Coral Reef Monitoring Program (PRCRMP) database (already in MBON since October 2020) with data from the ongoing 2021 monitoring cycle.
    2. U.S. Virgin Islands Territorial Coral Reef Monitoring Program (TCRMP) - Long-term (the early 2000s - present) monitoring of benthic and fish communities in the U.S. Virgin Islands, sponsored by NOAA CRCP and the University of Virgin Islands. We are finishing the first draft of all three event, occurrence, and measurements files.
    3. USVI and PR Mesophotic Coral Reef Characterizations - Characterization of mesophotic coral reef benthic and fish communities is key sites of Puerto Rico and USVI known to be important fish aggregation sites. The data in its native format was provided by the Caribbean Fisheries Management Council and the data collection is sponsored by NOAA Fisheries. We already compiled all event information and are working on the occurrence and measurements files.
    4. Fish Communities in Artificial Reefs of Puerto Rico - Characterization of fish assemblages associated with Puerto Rico's artificial reefs and their seasonality (2018-2019). This data was collected as part of an MS research thesis of the Department of Marine Sciences of the University of Puerto Rico focused on comparing fish abundance and biomass between natural and artificial reef habitats. Already have a draft event, occurrence, and measurement files. and currently are working on revising those.
  4. NANOOS
    1. [dataset]: UW Pelagic Hypoxia Hood Canal project, 2012-2013 Zooplankton dataset bio_data_guide#168 (comment)

What is the requested deadline and why?

TBD

What is the current status quo (i.e., what happens if this does not get done)?

These data are not available in MBON Data Portal

What indicates this is done (i.e., how do we know this is complete)?

data layers added to MBON Data Portal

Provide a description or any other important information.

ported from Trello

@MathewBiddle MathewBiddle added dataset Dataset that needs to be mobilized MBON Issues relating to the Marine Biodiversity Observation Network labels Jun 12, 2024
@MathewBiddle MathewBiddle self-assigned this Jun 12, 2024
@laurabrenskelle laurabrenskelle added the deprecated This will not be worked on label Aug 29, 2024
@MathewBiddle MathewBiddle added MBON Data Portal User Request Requests for things from users and removed deprecated This will not be worked on labels Sep 10, 2024
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dataset Dataset that needs to be mobilized MBON Data Portal MBON Issues relating to the Marine Biodiversity Observation Network User Request Requests for things from users
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