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Hello ! I am trying to run autodock vina, I have this txt file:
receptor = ab.pdbqt ligand = antigen.pdbqt
out= docking.pdbqt
center_x = 35.739 center_y = 26.403 center_z = 12.114
size_x = 30 size_y = 30 size_z = 30
log= log.txt
But I have this error: Error: could not open "antigen.pdbqt" for reading. Knowing that the pdbqt files I have it from amg autodock tool.
The text was updated successfully, but these errors were encountered:
Hello, maybe it's in a different folder?
Sorry, something went wrong.
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Hello !
I am trying to run autodock vina, I have this txt file:
Define the receptor and ligand files
receptor = ab.pdbqt
ligand = antigen.pdbqt
Output file for docking results
out= docking.pdbqt
Define the center of the search space
center_x = 35.739
center_y = 26.403
center_z = 12.114
Define the size of the search space (in Angstroms)
size_x = 30
size_y = 30
size_z = 30
Log file for Vina's output
log= log.txt
But I have this error:
Error: could not open "antigen.pdbqt" for reading.
Knowing that the pdbqt files I have it from amg autodock tool.
The text was updated successfully, but these errors were encountered: