From 252606a4e6a370ff2a86f36976cd9a58c77d7d23 Mon Sep 17 00:00:00 2001 From: Rebecca Asch Date: Wed, 28 Jun 2023 15:15:01 -0400 Subject: [PATCH] cleanup before PR review --- scripts/variantstore/wdl/GvsBulkIngestGenomes.wdl | 6 +++--- scripts/variantstore/wdl/GvsCreateFilterSet.wdl | 1 - scripts/variantstore/wdl/GvsUtils.wdl | 2 +- 3 files changed, 4 insertions(+), 5 deletions(-) diff --git a/scripts/variantstore/wdl/GvsBulkIngestGenomes.wdl b/scripts/variantstore/wdl/GvsBulkIngestGenomes.wdl index b7171270a99..33c29939ff2 100644 --- a/scripts/variantstore/wdl/GvsBulkIngestGenomes.wdl +++ b/scripts/variantstore/wdl/GvsBulkIngestGenomes.wdl @@ -116,7 +116,7 @@ task GetColumnNames { >>> runtime { - docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-13-alpine" + docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-23-alpine" memory: "3 GB" disks: "local-disk 10 HDD" cpu: 1 @@ -150,7 +150,7 @@ task GetWorkspaceName { >>> runtime { - docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-13-alpine" + docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-23-alpine" memory: "3 GB" disks: "local-disk 10 HDD" cpu: 1 @@ -197,7 +197,7 @@ task GenerateFOFNsFromDataTables { >>> runtime { - docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-13-alpine" + docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-23-alpine" memory: "3 GB" disks: "local-disk 200 HDD" cpu: 1 diff --git a/scripts/variantstore/wdl/GvsCreateFilterSet.wdl b/scripts/variantstore/wdl/GvsCreateFilterSet.wdl index 362100bf142..be0774d0e44 100644 --- a/scripts/variantstore/wdl/GvsCreateFilterSet.wdl +++ b/scripts/variantstore/wdl/GvsCreateFilterSet.wdl @@ -456,7 +456,6 @@ task PopulateFilterSetSites { --schema "filter_set_name:string,location:integer,filters:string" \ ${bq_table} \ ~{filter_set_name}.filter_sites_load.tsv > status_load_filter_set_sites - >>> runtime { diff --git a/scripts/variantstore/wdl/GvsUtils.wdl b/scripts/variantstore/wdl/GvsUtils.wdl index d1cb3454e89..0b482ebffb5 100644 --- a/scripts/variantstore/wdl/GvsUtils.wdl +++ b/scripts/variantstore/wdl/GvsUtils.wdl @@ -510,7 +510,7 @@ task ScaleXYBedValues { } runtime { - docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-13-alpine" + docker: "us.gcr.io/broad-dsde-methods/variantstore:2023-06-23-alpine" maxRetries: 3 memory: "7 GB" preemptible: 3