From 4959f62ebed4fea90ba970808cfb76a42be01018 Mon Sep 17 00:00:00 2001 From: Mark Walker Date: Fri, 4 Aug 2023 16:54:13 -0400 Subject: [PATCH] Resolve new linting errors (#580) --- src/sv_utils/src/sv_utils/benchmark_variant_filter.py | 2 +- src/sv_utils/tests/common_test_utils.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/src/sv_utils/src/sv_utils/benchmark_variant_filter.py b/src/sv_utils/src/sv_utils/benchmark_variant_filter.py index 39c7e6520..c853df3a1 100644 --- a/src/sv_utils/src/sv_utils/benchmark_variant_filter.py +++ b/src/sv_utils/src/sv_utils/benchmark_variant_filter.py @@ -16,7 +16,7 @@ from sv_utils.get_truth_overlap \ import SampleConfidentVariants, ConfidentVariants, PrecisionRecallCurve, SvTypeCutoffSelector -from typing import List, Dict, Text, Iterable, Optional, Mapping, Union, Tuple, Set, Collection, Iterator, TypeVar,\ +from typing import List, Dict, Text, Iterable, Optional, Mapping, Union, Tuple, Set, Collection, Iterator, TypeVar, \ Sequence, Container diff --git a/src/sv_utils/tests/common_test_utils.py b/src/sv_utils/tests/common_test_utils.py index a51100431..8dc05d0fe 100644 --- a/src/sv_utils/tests/common_test_utils.py +++ b/src/sv_utils/tests/common_test_utils.py @@ -13,7 +13,7 @@ def assert_series_equal(s1: pandas.Series, s2: pandas.Series, context: str, chec assert_indices_equal(s1.index, s2.index, context=context) assert numpy.array_equal(s1.isnull().values, s2.isnull().values), f"{context}: null values not equal" - assert numpy.array_equal(s1.loc[~s1.isnull().values], s2.loc[~s2.isnull().values]),\ + assert numpy.array_equal(s1.loc[~s1.isnull().values], s2.loc[~s2.isnull().values]), \ f"{context}: non-null values not equal"