From 451a808f1cc7bed5a4f6467a934b4b5f4e9c09d8 Mon Sep 17 00:00:00 2001 From: Alexis Renchon Date: Fri, 28 Jun 2024 10:44:31 -0700 Subject: [PATCH] tag v0.12.5 --- .buildkite/Manifest.toml | 226 ++++++++++++++++++++------------------- NEWS.md | 19 ++++ Project.toml | 2 +- docs/Manifest.toml | 144 ++++++++++++------------- 4 files changed, 207 insertions(+), 184 deletions(-) diff --git a/.buildkite/Manifest.toml b/.buildkite/Manifest.toml index 03b18186b7..2ca875fc78 100644 --- a/.buildkite/Manifest.toml +++ b/.buildkite/Manifest.toml @@ -5,9 +5,9 @@ manifest_format = "2.0" project_hash = "d68e0a492fb89a105b905419594639d3a6a2129d" [[deps.ADTypes]] -git-tree-sha1 = "fc02d55798c1af91123d07915a990fbb9a10d146" +git-tree-sha1 = "7a6b285f217ba92b5b474b783b4c2e8cf8218aaa" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "1.3.0" +version = "1.5.3" weakdeps = ["ChainRulesCore", "EnzymeCore"] [deps.ADTypes.extensions] @@ -124,9 +124,9 @@ version = "7.11.0" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "420e2853770f50e5306b9d96b5a66f26e7c73bc6" +git-tree-sha1 = "600078184f7de14b3e60efe13fc0ba5c59f6dca5" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.9.4" +version = "1.10.0" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -215,15 +215,15 @@ uuid = "9718e550-a3fa-408a-8086-8db961cd8217" version = "0.1.1" [[deps.BitFlags]] -git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" +git-tree-sha1 = "0691e34b3bb8be9307330f88d1a3c3f25466c24d" uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" -version = "0.1.8" +version = "0.1.9" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "0c5f81f47bbbcf4aea7b2959135713459170798b" +git-tree-sha1 = "f21cfd4950cb9f0587d5067e69405ad2acd27b87" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.5" +version = "0.1.6" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] @@ -250,9 +250,9 @@ version = "0.1.3" [[deps.CPUSummary]] deps = ["CpuId", "IfElse", "PrecompileTools", "Static"] -git-tree-sha1 = "585a387a490f1c4bd88be67eea15b93da5e85db7" +git-tree-sha1 = "5a97e67919535d6841172016c9530fd69494e5ec" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.2.5" +version = "0.2.6" [[deps.CRC32c]] uuid = "8bf52ea8-c179-5cab-976a-9e18b702a9bc" @@ -295,9 +295,9 @@ version = "0.9.0+0" [[deps.CUDA_Runtime_Discovery]] deps = ["Libdl"] -git-tree-sha1 = "5db9da5fdeaa708c22ba86b82c49528f402497f2" +git-tree-sha1 = "f3b237289a5a77c759b2dd5d4c2ff641d67c4030" uuid = "1af6417a-86b4-443c-805f-a4643ffb695f" -version = "0.3.3" +version = "0.3.4" [[deps.CUDA_Runtime_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] @@ -352,10 +352,10 @@ weakdeps = ["SparseArrays"] ChainRulesCoreSparseArraysExt = "SparseArrays" [[deps.ClimaAnalysis]] -deps = ["NCDatasets", "OrderedCollections", "Statistics"] -git-tree-sha1 = "c2e1c0d5c30a2519a4282988037b255dbc9aee00" +deps = ["NCDatasets", "OrderedCollections", "Reexport", "Statistics"] +git-tree-sha1 = "9282a8cf3086039a2e7e76c35d423fbfa2bde630" uuid = "29b5916a-a76c-4e73-9657-3c8fd22e65e6" -version = "0.5.3" +version = "0.5.5" [deps.ClimaAnalysis.extensions] CairoMakieExt = "CairoMakie" @@ -366,9 +366,9 @@ version = "0.5.3" GeoMakie = "db073c08-6b98-4ee5-b6a4-5efafb3259c6" [[deps.ClimaComms]] -git-tree-sha1 = "d76590e99fa942e07f1e992a4d4a5e25121a26d6" +git-tree-sha1 = "2ca8c9ca6131a7be8ca262e6db79bc7aa94ab597" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.6.2" +version = "0.6.3" weakdeps = ["CUDA", "MPI"] [deps.ClimaComms.extensions] @@ -394,15 +394,15 @@ version = "0.4.5" [[deps.ClimaDiagnostics]] deps = ["Accessors", "ClimaComms", "ClimaCore", "Dates", "NCDatasets", "SciMLBase"] -git-tree-sha1 = "aff194804df0fcfcf69a80c58978b84777272619" +git-tree-sha1 = "228ff3bc4dbd7329ef054f9bfbbe34075234ca25" uuid = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f" -version = "0.2.2" +version = "0.2.3" [[deps.ClimaLand]] deps = ["Adapt", "ArtifactWrappers", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaUtilities", "DataFrames", "Dates", "DocStringExtensions", "Insolation", "Interpolations", "IntervalSets", "LazyArtifacts", "LinearAlgebra", "NCDatasets", "SciMLBase", "StaticArrays", "SurfaceFluxes", "Thermodynamics", "UnrolledUtilities"] path = ".." uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532" -version = "0.12.4" +version = "0.12.5" weakdeps = ["CSV", "CUDA", "ClimaParams", "Flux", "HTTP", "StatsBase", "cuDNN"] [deps.ClimaLand.extensions] @@ -411,9 +411,9 @@ weakdeps = ["CSV", "CUDA", "ClimaParams", "Flux", "HTTP", "StatsBase", "cuDNN"] [[deps.ClimaParams]] deps = ["DocStringExtensions", "TOML", "Test"] -git-tree-sha1 = "8da1dc4aa297847cf74c51168cab1995e5631eeb" +git-tree-sha1 = "0b5afc75bd3aa7c30d76c2d33b8361f961e86237" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "0.10.7" +version = "0.10.8" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -433,20 +433,18 @@ version = "0.7.32" [[deps.ClimaUtilities]] deps = ["Artifacts", "Dates"] -git-tree-sha1 = "af4af7e14e02861c1a13c9ee0efade4c863fab9a" +git-tree-sha1 = "9641bc5261562817fad2472f85325d8ae3047ac8" uuid = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513" -version = "0.1.8" +version = "0.1.9" [deps.ClimaUtilities.extensions] - CUDAUtilsExt = ["ClimaCore", "CUDA"] - DataHandlingExt = ["ClimaCore", "NCDatasets"] - InterpolationsRegridderExt = ["Interpolations", "ClimaCore"] - MPIUtilsExt = "ClimaComms" - NCFileReaderExt = "NCDatasets" - SpaceVaryingInputsExt = ["ClimaCore", "NCDatasets"] - TempestRegridderExt = "ClimaCoreTempestRemap" - TimeVaryingInputs0DExt = "ClimaCore" - TimeVaryingInputsExt = ["ClimaCore", "NCDatasets"] + ClimaUtilitiesClimaCommsCUDAExt = ["ClimaComms", "CUDA"] + ClimaUtilitiesClimaCommsExt = "ClimaComms" + ClimaUtilitiesClimaCoreExt = "ClimaCore" + ClimaUtilitiesClimaCoreInterpolationsExt = ["ClimaCore", "Interpolations"] + ClimaUtilitiesClimaCoreNCDatasetsExt = ["ClimaCore", "NCDatasets"] + ClimaUtilitiesClimaCoreTempestRemapExt = "ClimaCoreTempestRemap" + ClimaUtilitiesNCDatasetsExt = "NCDatasets" [deps.ClimaUtilities.weakdeps] Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" @@ -459,9 +457,9 @@ version = "0.1.8" [[deps.CloseOpenIntervals]] deps = ["Static", "StaticArrayInterface"] -git-tree-sha1 = "70232f82ffaab9dc52585e0dd043b5e0c6b714f1" +git-tree-sha1 = "05ba0d07cd4fd8b7a39541e31a7b0254704ea581" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.12" +version = "0.1.13" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -627,9 +625,9 @@ version = "0.1.2" [[deps.DelaunayTriangulation]] deps = ["EnumX", "ExactPredicates", "Random"] -git-tree-sha1 = "1755070db557ec2c37df2664c75600298b0c1cfc" +git-tree-sha1 = "b0cb128d2e100646573e1da8565b02491fddb5ef" uuid = "927a84f5-c5f4-47a5-9785-b46e178433df" -version = "1.0.3" +version = "1.0.4" [[deps.DelimitedFiles]] deps = ["Mmap"] @@ -639,9 +637,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "2c6b7bf16fd850c551a765e313e7522ba455cbfd" +git-tree-sha1 = "d1e8a4642e28b0945bde6e2e1ac569b9e0abd728" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.151.4" +version = "6.151.5" [deps.DiffEqBase.extensions] DiffEqBaseCUDAExt = "CUDA" @@ -693,9 +691,9 @@ version = "1.15.1" [[deps.DifferentiationInterface]] deps = ["ADTypes", "Compat", "DocStringExtensions", "FillArrays", "LinearAlgebra", "PackageExtensionCompat", "SparseArrays", "SparseMatrixColorings"] -git-tree-sha1 = "23c6df13ad8fcffde4b0596d798911d2e309fc2c" +git-tree-sha1 = "695217e97ee1ce0248f4a56c14af88ba33c585fd" uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" -version = "0.5.5" +version = "0.5.7" [deps.DifferentiationInterface.extensions] DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore" @@ -798,9 +796,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "88bc63137eb033acc3afe1b9875717889c718c46" +git-tree-sha1 = "3a3177ba05b4763234819060fb6c2e1613379ca6" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.7.5" +version = "0.7.6" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -883,9 +881,9 @@ version = "0.1.1" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] -git-tree-sha1 = "2be93e36303143c6fffd07e2222bbade35194d9e" +git-tree-sha1 = "bd19de6fe8a3b18888f35e79832f97544684caa7" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.3.3" +version = "0.3.4" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -961,9 +959,9 @@ version = "0.8.5" [[deps.Flux]] deps = ["Adapt", "ChainRulesCore", "Compat", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] -git-tree-sha1 = "a5475163b611812d073171583982c42ea48d22b0" +git-tree-sha1 = "edacf029ed6276301e455e34d7ceeba8cc34078a" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.14.15" +version = "0.14.16" [deps.Flux.extensions] FluxAMDGPUExt = "AMDGPU" @@ -1050,16 +1048,16 @@ deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[deps.GLFW_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] -git-tree-sha1 = "ff38ba61beff76b8f4acad8ab0c97ef73bb670cb" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll", "xkbcommon_jll"] +git-tree-sha1 = "3f74912a156096bd8fdbef211eff66ab446e7297" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.3.9+0" +version = "3.4.0+0" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "c154546e322a9c73364e8a60430b0f79b812d320" +git-tree-sha1 = "5c9de6d5af87acd2cf719e214ed7d51e14017b7a" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "10.2.0" +version = "10.2.2" [[deps.GPUArraysCore]] deps = ["Adapt"] @@ -1093,9 +1091,9 @@ version = "0.5.8" [[deps.GeoInterface]] deps = ["Extents"] -git-tree-sha1 = "801aef8228f7f04972e596b09d4dba481807c913" +git-tree-sha1 = "9fff8990361d5127b770e3454488360443019bb3" uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" -version = "1.3.4" +version = "1.3.5" [[deps.GeometryBasics]] deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] @@ -1134,9 +1132,9 @@ version = "1.3.14+0" [[deps.Graphs]] deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "334d300809ae0a68ceee3444c6e99ded412bf0b3" +git-tree-sha1 = "ebd18c326fa6cee1efb7da9a3b45cf69da2ed4d9" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.11.1" +version = "1.11.2" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] @@ -1179,15 +1177,15 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "eb8fed28f4994600e29beef49744639d985a04b2" +git-tree-sha1 = "8e070b599339d622e9a081d17230d74a5c473293" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.16" +version = "0.1.17" [[deps.Hwloc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "ca0f6bf568b4bfc807e7537f081c81e35ceca114" +git-tree-sha1 = "1d334207121865ac8c1c97eb7f42d0339e4635bf" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.10.0+0" +version = "2.11.0+0" [[deps.HypergeometricFunctions]] deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] @@ -1259,9 +1257,15 @@ version = "0.3.1" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "9cc2baf75c6d09f9da536ddf58eb2f29dedaf461" +git-tree-sha1 = "86356004f30f8e737eff143d57d41bd580e437aa" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.4.0" +version = "1.4.1" + + [deps.InlineStrings.extensions] + ArrowTypesExt = "ArrowTypes" + + [deps.InlineStrings.weakdeps] + ArrowTypes = "31f734f8-188a-4ce0-8406-c8a06bd891cd" [[deps.Insolation]] deps = ["Artifacts", "Dates", "DelimitedFiles", "Interpolations"] @@ -1396,9 +1400,9 @@ version = "0.6.0" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "8e5a339882cc401688d79b811d923a38ba77d50a" +git-tree-sha1 = "d0448cebd5919e06ca5edc7a264631790de810ec" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.20" +version = "0.9.22" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1497,9 +1501,9 @@ version = "0.16.3" [[deps.LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"] -git-tree-sha1 = "62edfee3211981241b57ff1cedf4d74d79519277" +git-tree-sha1 = "a9eaadb366f5493a5654e843864c13d8b107548c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.15" +version = "0.1.17" [[deps.LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays"] @@ -1685,9 +1689,9 @@ version = "1.0.3" [[deps.LoopVectorization]] deps = ["ArrayInterface", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "8f6786d8b2b3248d79db3ad359ce95382d5a6df8" +git-tree-sha1 = "8084c25a250e00ae427a379a5b607e7aed96a2dd" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.170" +version = "0.12.171" weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] [deps.LoopVectorization.extensions] @@ -1713,9 +1717,9 @@ version = "0.4.4" [[deps.MPI]] deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "PkgVersion", "PrecompileTools", "Requires", "Serialization", "Sockets"] -git-tree-sha1 = "4e3136db3735924f96632a5b40a5979f1f53fa07" +git-tree-sha1 = "14cef41baf5b675b192b02a22c710f725ab333a7" uuid = "da04e1cc-30fd-572f-bb4f-1f8673147195" -version = "0.20.19" +version = "0.20.20" [deps.MPI.extensions] AMDGPUExt = "AMDGPU" @@ -1874,9 +1878,9 @@ version = "4.5.1" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "3d4617f943afe6410206a5294a95948c8d1b35bd" +git-tree-sha1 = "78de319bce99d1d8c1d4fe5401f7cfc2627df396" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.17" +version = "0.9.18" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -1932,9 +1936,9 @@ version = "1.2.0" [[deps.NonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Preferences", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] -git-tree-sha1 = "40325dcea1cb84a108efe05966bbb1f4b98e5eea" +git-tree-sha1 = "3adb1e5945b5a6b1eaee754077f25ccc402edd7f" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "3.13.0" +version = "3.13.1" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" @@ -2160,15 +2164,15 @@ version = "1.40.4" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "b3e2bae88cf07baf0a051fe09666b8ef97aefe93" +git-tree-sha1 = "9ff799e8fb8ed6717710feee3be3bc20645daa97" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.7.14" +version = "0.7.15" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "240d7170f5ffdb285f9427b92333c3463bf65bf6" +git-tree-sha1 = "645bed98cd47f72f67316fd42fc47dee771aefcd" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.2.1" +version = "0.2.2" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -2326,9 +2330,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "980aabbeac7aee70d0e452a72b0c68b5b266cc7b" +git-tree-sha1 = "3400ce27995422fb88ffcd3af9945565aad947f0" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.24.0" +version = "3.23.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -2417,9 +2421,9 @@ version = "0.1.0" [[deps.SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "3aac6d68c5e57449f5b9b865c9ba50ac2970c4cf" +git-tree-sha1 = "456f610ca2fbd1c14f5fcf31c6bfadc55e7d66e0" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.42" +version = "0.6.43" [[deps.SafeTestsets]] git-tree-sha1 = "81ec49d645af090901120a1542e67ecbbe044db3" @@ -2428,9 +2432,9 @@ version = "0.1.0" [[deps.SciMLBase]] deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "7a6c5c8c38d2e37f45d4686c3598c20c1aebf48e" +git-tree-sha1 = "281e82f2ae2b73262fed9e7a518711eb7feb7e59" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.41.3" +version = "2.42.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2459,9 +2463,9 @@ version = "0.3.8" [[deps.SciMLStructures]] deps = ["ArrayInterface"] -git-tree-sha1 = "6ab4beaf88dcdd2639bead916f2347f81dcacd0e" +git-tree-sha1 = "cfdd1200d150df1d3c055cc72ee6850742e982d7" uuid = "53ae85a6-f571-4167-b2af-e1d143709226" -version = "1.3.0" +version = "1.4.1" [[deps.Scratch]] deps = ["Dates"] @@ -2523,9 +2527,9 @@ version = "1.1.0" [[deps.SimpleNonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "DiffResults", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "913754ccbbc78720a4542b56a6bdfbab1c84c8f2" +git-tree-sha1 = "58b144f34e44252b2de0acb5a9dbbb7ea5cd75d7" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "1.10.0" +version = "1.10.1" [deps.SimpleNonlinearSolve.extensions] SimpleNonlinearSolveChainRulesCoreExt = "ChainRulesCore" @@ -2633,9 +2637,9 @@ version = "0.8.10" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" +git-tree-sha1 = "8963e5a083c837531298fc41599182a759a87a6d" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.5.0" +version = "1.5.1" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2644,9 +2648,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "6e00379a24597be4ae1ee6b2d882e15392040132" +git-tree-sha1 = "20833c5b7f7edf0e5026f23db7f268e4f23ec577" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.9.5" +version = "1.9.6" weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] @@ -2688,9 +2692,9 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"] [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] -git-tree-sha1 = "25349bf8f63aa36acbff5e3550a86e9f5b0ef682" +git-tree-sha1 = "f35f6ab602df8413a50c4a25ca14de821e8605fb" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.5.6" +version = "0.5.7" [[deps.StringManipulation]] deps = ["PrecompileTools"] @@ -2732,9 +2736,9 @@ weakdeps = ["ClimaParams"] [[deps.SymbolicIndexingInterface]] deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "2d1b8941f58d0c878b3c71d9b17188a2eb649a8b" +git-tree-sha1 = "a5f6f138b740c9d93d76f0feddd3092e6ef002b7" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.24" +version = "0.3.22" [[deps.TOML]] deps = ["Dates"] @@ -2807,9 +2811,9 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.24" [[deps.TranscodingStreams]] -git-tree-sha1 = "a947ea21087caba0a798c5e494d0bb78e3a1a3a0" +git-tree-sha1 = "d73336d81cafdc277ff45558bb7eaa2b04a8e472" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.10.9" +version = "0.10.10" weakdeps = ["Random", "Test"] [deps.TranscodingStreams.extensions] @@ -2837,9 +2841,9 @@ version = "0.4.80" [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "66c68a20907800c0b7c04ff8a6164115e8747de2" +git-tree-sha1 = "be986ad9dac14888ba338c2554dcfec6939e1393" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.2.0" +version = "0.2.1" [[deps.Tricks]] git-tree-sha1 = "eae1bb484cd63b36999ee58be2de6c178105112f" @@ -2915,9 +2919,9 @@ version = "0.2.1" [[deps.UnsafeAtomicsLLVM]] deps = ["LLVM", "UnsafeAtomics"] -git-tree-sha1 = "d9f5962fecd5ccece07db1ff006fb0b5271bdfdd" +git-tree-sha1 = "bf2c553f25e954a9b38c9c0593a59bb13113f9e5" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" -version = "0.1.4" +version = "0.1.5" [[deps.Unzip]] git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" @@ -2932,9 +2936,9 @@ version = "0.4.6" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] -git-tree-sha1 = "e863582a41c5731f51fd050563ae91eb33cf09be" +git-tree-sha1 = "e7f5b81c65eb858bed630fe006837b935518aca5" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.68" +version = "0.21.70" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -2979,15 +2983,15 @@ version = "1.6.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "52ff2af32e591541550bd753c0da8b9bc92bb9d9" +git-tree-sha1 = "d9717ce3518dc68a99e6b96300813760d887a01d" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.7+0" +version = "2.13.1+0" [[deps.XSLT_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] -git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "XML2_jll", "Zlib_jll"] +git-tree-sha1 = "a54ee957f4c86b526460a720dbc882fa5edcbefc" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" -version = "1.1.34+0" +version = "1.1.41+0" [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -3075,9 +3079,9 @@ version = "0.1.1+0" [[deps.Xorg_libxcb_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] -git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d" +git-tree-sha1 = "bcd466676fef0878338c61e655629fa7bbc69d8e" uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" -version = "1.15.0+0" +version = "1.17.0+0" [[deps.Xorg_libxkbfile_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] diff --git a/NEWS.md b/NEWS.md index f919cfc4b5..a5d278f982 100644 --- a/NEWS.md +++ b/NEWS.md @@ -3,6 +3,7 @@ ClimaLand.jl Release Notes main -------- +<<<<<<< HEAD Improve Performance of soil canopy model - PR [#666] - PR [#677] Remove norm condition @@ -14,6 +15,24 @@ Soil implicit solver Misc - PR [#685] Renames jacobian update functions to align with our convention for tendency functions +======= + +v0.12.5 +-------- +- Turn of dss + PR[#650](https://github.com/CliMA/ClimaLand.jl/pull/650) +- Add ClimaCoupler downstream test + PR [#680](https://github.com/CliMA/ClimaLand.jl/pull/680) +- Adds ClimaLand.Diagnostics + PR [#628](https://github.com/CliMA/ClimaLand.jl/pull/628) +- Improve Performance of soil canopy model + PR [#666](https://github.com/CliMA/ClimaLand.jl/pull/666) + PR [#677](https://github.com/CliMA/ClimaLand.jl/pull/677) +- Add base global soil canopy run to benchmark and experiments + PR [#591](https://github.com/CliMA/ClimaLand.jl/pull/591) + PR [#669](https://github.com/CliMA/ClimaLand.jl/pull/669) + +>>>>>>> 668f23f0 (tag v0.12.5) v0.12.4 -------- - Fix various canopy flux bugs diff --git a/Project.toml b/Project.toml index eba8a74e3f..6a474d6d36 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "ClimaLand" uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532" authors = ["Clima Land Team"] -version = "0.12.4" +version = "0.12.5" [deps] Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 3c9ec87cc5..d9bee72dbe 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -5,9 +5,9 @@ manifest_format = "2.0" project_hash = "6c3f79ccae513840cc13b9ac947575c2305b507f" [[deps.ADTypes]] -git-tree-sha1 = "fa0822e5baee6e23081c2685ae27265dabee23d8" +git-tree-sha1 = "ae44a0c3d68a420d4ac0fa1f7e0c034ccecb6dc5" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "1.4.0" +version = "1.5.2" weakdeps = ["ChainRulesCore", "EnzymeCore"] [deps.ADTypes.extensions] @@ -123,9 +123,9 @@ version = "7.11.0" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "420e2853770f50e5306b9d96b5a66f26e7c73bc6" +git-tree-sha1 = "600078184f7de14b3e60efe13fc0ba5c59f6dca5" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.9.4" +version = "1.10.0" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -215,9 +215,9 @@ version = "0.1.9" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "0c5f81f47bbbcf4aea7b2959135713459170798b" +git-tree-sha1 = "f21cfd4950cb9f0587d5067e69405ad2acd27b87" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.5" +version = "0.1.6" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] @@ -250,9 +250,9 @@ version = "0.1.3" [[deps.CPUSummary]] deps = ["CpuId", "IfElse", "PrecompileTools", "Static"] -git-tree-sha1 = "585a387a490f1c4bd88be67eea15b93da5e85db7" +git-tree-sha1 = "5a97e67919535d6841172016c9530fd69494e5ec" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.2.5" +version = "0.2.6" [[deps.CRC32c]] uuid = "8bf52ea8-c179-5cab-976a-9e18b702a9bc" @@ -352,9 +352,9 @@ weakdeps = ["SparseArrays"] ChainRulesCoreSparseArraysExt = "SparseArrays" [[deps.ClimaComms]] -git-tree-sha1 = "d76590e99fa942e07f1e992a4d4a5e25121a26d6" +git-tree-sha1 = "2ca8c9ca6131a7be8ca262e6db79bc7aa94ab597" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.6.2" +version = "0.6.3" [deps.ClimaComms.extensions] ClimaCommsCUDAExt = "CUDA" @@ -377,15 +377,15 @@ weakdeps = ["CUDA", "Krylov"] [[deps.ClimaDiagnostics]] deps = ["Accessors", "ClimaComms", "ClimaCore", "Dates", "NCDatasets", "SciMLBase"] -git-tree-sha1 = "aff194804df0fcfcf69a80c58978b84777272619" +git-tree-sha1 = "228ff3bc4dbd7329ef054f9bfbbe34075234ca25" uuid = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f" -version = "0.2.2" +version = "0.2.3" [[deps.ClimaLand]] deps = ["Adapt", "ArtifactWrappers", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaUtilities", "DataFrames", "Dates", "DocStringExtensions", "Insolation", "Interpolations", "IntervalSets", "LazyArtifacts", "LinearAlgebra", "NCDatasets", "SciMLBase", "StaticArrays", "SurfaceFluxes", "Thermodynamics", "UnrolledUtilities"] path = ".." uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532" -version = "0.12.4" +version = "0.12.5" weakdeps = ["CSV", "CUDA", "ClimaParams", "Flux", "HTTP", "StatsBase", "cuDNN"] [deps.ClimaLand.extensions] @@ -394,9 +394,9 @@ weakdeps = ["CSV", "CUDA", "ClimaParams", "Flux", "HTTP", "StatsBase", "cuDNN"] [[deps.ClimaParams]] deps = ["DocStringExtensions", "TOML", "Test"] -git-tree-sha1 = "8da1dc4aa297847cf74c51168cab1995e5631eeb" +git-tree-sha1 = "0b5afc75bd3aa7c30d76c2d33b8361f961e86237" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "0.10.7" +version = "0.10.8" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -440,9 +440,9 @@ version = "0.1.9" [[deps.CloseOpenIntervals]] deps = ["Static", "StaticArrayInterface"] -git-tree-sha1 = "70232f82ffaab9dc52585e0dd043b5e0c6b714f1" +git-tree-sha1 = "05ba0d07cd4fd8b7a39541e31a7b0254704ea581" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.12" +version = "0.1.13" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -620,9 +620,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "2c6b7bf16fd850c551a765e313e7522ba455cbfd" +git-tree-sha1 = "d1e8a4642e28b0945bde6e2e1ac569b9e0abd728" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.151.4" +version = "6.151.5" [deps.DiffEqBase.extensions] DiffEqBaseCUDAExt = "CUDA" @@ -674,9 +674,9 @@ version = "1.15.1" [[deps.DifferentiationInterface]] deps = ["ADTypes", "Compat", "DocStringExtensions", "FillArrays", "LinearAlgebra", "PackageExtensionCompat", "SparseArrays", "SparseMatrixColorings"] -git-tree-sha1 = "23c6df13ad8fcffde4b0596d798911d2e309fc2c" +git-tree-sha1 = "695217e97ee1ce0248f4a56c14af88ba33c585fd" uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" -version = "0.5.5" +version = "0.5.7" [deps.DifferentiationInterface.extensions] DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore" @@ -742,9 +742,9 @@ version = "0.9.3" [[deps.Documenter]] deps = ["ANSIColoredPrinters", "AbstractTrees", "Base64", "CodecZlib", "Dates", "DocStringExtensions", "Downloads", "Git", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "MarkdownAST", "Pkg", "PrecompileTools", "REPL", "RegistryInstances", "SHA", "TOML", "Test", "Unicode"] -git-tree-sha1 = "5461b2a67beb9089980e2f8f25145186b6d34f91" +git-tree-sha1 = "76deb8c15f37a3853f13ea2226b8f2577652de05" uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4" -version = "1.4.1" +version = "1.5.0" [[deps.Downloads]] deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] @@ -774,9 +774,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "88bc63137eb033acc3afe1b9875717889c718c46" +git-tree-sha1 = "3a3177ba05b4763234819060fb6c2e1613379ca6" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.7.5" +version = "0.7.6" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -859,9 +859,9 @@ version = "0.1.1" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] -git-tree-sha1 = "2be93e36303143c6fffd07e2222bbade35194d9e" +git-tree-sha1 = "bd19de6fe8a3b18888f35e79832f97544684caa7" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.3.3" +version = "0.3.4" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -1038,9 +1038,9 @@ version = "6.2.1+6" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "c154546e322a9c73364e8a60430b0f79b812d320" +git-tree-sha1 = "5c9de6d5af87acd2cf719e214ed7d51e14017b7a" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "10.2.0" +version = "10.2.2" [[deps.GPUArraysCore]] deps = ["Adapt"] @@ -1180,15 +1180,15 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "eb8fed28f4994600e29beef49744639d985a04b2" +git-tree-sha1 = "8e070b599339d622e9a081d17230d74a5c473293" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.16" +version = "0.1.17" [[deps.Hwloc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "ca0f6bf568b4bfc807e7537f081c81e35ceca114" +git-tree-sha1 = "1d334207121865ac8c1c97eb7f42d0339e4635bf" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.10.0+0" +version = "2.11.0+0" [[deps.HypergeometricFunctions]] deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] @@ -1409,9 +1409,9 @@ version = "0.6.0" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "8e5a339882cc401688d79b811d923a38ba77d50a" +git-tree-sha1 = "d0448cebd5919e06ca5edc7a264631790de810ec" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.20" +version = "0.9.22" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1510,9 +1510,9 @@ version = "0.16.3" [[deps.LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"] -git-tree-sha1 = "62edfee3211981241b57ff1cedf4d74d79519277" +git-tree-sha1 = "a9eaadb366f5493a5654e843864c13d8b107548c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.15" +version = "0.1.17" [[deps.LazilyInitializedFields]] git-tree-sha1 = "8f7f3cabab0fd1800699663533b6d5cb3fc0e612" @@ -1709,9 +1709,9 @@ version = "1.0.3" [[deps.LoopVectorization]] deps = ["ArrayInterface", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "8f6786d8b2b3248d79db3ad359ce95382d5a6df8" +git-tree-sha1 = "8084c25a250e00ae427a379a5b607e7aed96a2dd" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.170" +version = "0.12.171" weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] [deps.LoopVectorization.extensions] @@ -1954,9 +1954,9 @@ version = "1.2.0" [[deps.NonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Preferences", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] -git-tree-sha1 = "40325dcea1cb84a108efe05966bbb1f4b98e5eea" +git-tree-sha1 = "3adb1e5945b5a6b1eaee754077f25ccc402edd7f" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "3.13.0" +version = "3.13.1" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" @@ -2188,15 +2188,15 @@ version = "1.40.4" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "b3e2bae88cf07baf0a051fe09666b8ef97aefe93" +git-tree-sha1 = "9ff799e8fb8ed6717710feee3be3bc20645daa97" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.7.14" +version = "0.7.15" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "240d7170f5ffdb285f9427b92333c3463bf65bf6" +git-tree-sha1 = "645bed98cd47f72f67316fd42fc47dee771aefcd" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.2.1" +version = "0.2.2" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -2441,9 +2441,9 @@ version = "0.1.0" [[deps.SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "3aac6d68c5e57449f5b9b865c9ba50ac2970c4cf" +git-tree-sha1 = "456f610ca2fbd1c14f5fcf31c6bfadc55e7d66e0" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.42" +version = "0.6.43" [[deps.SciMLBase]] deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] @@ -2478,9 +2478,9 @@ version = "0.3.8" [[deps.SciMLStructures]] deps = ["ArrayInterface"] -git-tree-sha1 = "6ab4beaf88dcdd2639bead916f2347f81dcacd0e" +git-tree-sha1 = "cfdd1200d150df1d3c055cc72ee6850742e982d7" uuid = "53ae85a6-f571-4167-b2af-e1d143709226" -version = "1.3.0" +version = "1.4.1" [[deps.Scratch]] deps = ["Dates"] @@ -2542,9 +2542,9 @@ version = "1.1.0" [[deps.SimpleNonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "DiffResults", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "913754ccbbc78720a4542b56a6bdfbab1c84c8f2" +git-tree-sha1 = "58b144f34e44252b2de0acb5a9dbbb7ea5cd75d7" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "1.10.0" +version = "1.10.1" [deps.SimpleNonlinearSolve.extensions] SimpleNonlinearSolveChainRulesCoreExt = "ChainRulesCore" @@ -2652,9 +2652,9 @@ version = "0.8.10" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" +git-tree-sha1 = "8963e5a083c837531298fc41599182a759a87a6d" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.5.0" +version = "1.5.1" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2663,9 +2663,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "6e00379a24597be4ae1ee6b2d882e15392040132" +git-tree-sha1 = "20833c5b7f7edf0e5026f23db7f268e4f23ec577" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.9.5" +version = "1.9.6" weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] @@ -2707,9 +2707,9 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"] [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] -git-tree-sha1 = "25349bf8f63aa36acbff5e3550a86e9f5b0ef682" +git-tree-sha1 = "f35f6ab602df8413a50c4a25ca14de821e8605fb" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.5.6" +version = "0.5.7" [[deps.StringManipulation]] deps = ["PrecompileTools"] @@ -2826,9 +2826,9 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.24" [[deps.TranscodingStreams]] -git-tree-sha1 = "a947ea21087caba0a798c5e494d0bb78e3a1a3a0" +git-tree-sha1 = "d73336d81cafdc277ff45558bb7eaa2b04a8e472" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.10.9" +version = "0.10.10" weakdeps = ["Random", "Test"] [deps.TranscodingStreams.extensions] @@ -2856,9 +2856,9 @@ version = "0.4.80" [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "66c68a20907800c0b7c04ff8a6164115e8747de2" +git-tree-sha1 = "be986ad9dac14888ba338c2554dcfec6939e1393" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.2.0" +version = "0.2.1" [[deps.Tricks]] git-tree-sha1 = "eae1bb484cd63b36999ee58be2de6c178105112f" @@ -2934,9 +2934,9 @@ version = "0.2.1" [[deps.UnsafeAtomicsLLVM]] deps = ["LLVM", "UnsafeAtomics"] -git-tree-sha1 = "d9f5962fecd5ccece07db1ff006fb0b5271bdfdd" +git-tree-sha1 = "bf2c553f25e954a9b38c9c0593a59bb13113f9e5" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" -version = "0.1.4" +version = "0.1.5" [[deps.Unzip]] git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" @@ -2951,9 +2951,9 @@ version = "0.4.6" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] -git-tree-sha1 = "e863582a41c5731f51fd050563ae91eb33cf09be" +git-tree-sha1 = "e7f5b81c65eb858bed630fe006837b935518aca5" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.68" +version = "0.21.70" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -2998,15 +2998,15 @@ version = "1.6.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "52ff2af32e591541550bd753c0da8b9bc92bb9d9" +git-tree-sha1 = "d9717ce3518dc68a99e6b96300813760d887a01d" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.7+0" +version = "2.13.1+0" [[deps.XSLT_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] -git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "XML2_jll", "Zlib_jll"] +git-tree-sha1 = "a54ee957f4c86b526460a720dbc882fa5edcbefc" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" -version = "1.1.34+0" +version = "1.1.41+0" [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -3094,9 +3094,9 @@ version = "0.1.1+0" [[deps.Xorg_libxcb_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] -git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d" +git-tree-sha1 = "bcd466676fef0878338c61e655629fa7bbc69d8e" uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" -version = "1.15.0+0" +version = "1.17.0+0" [[deps.Xorg_libxkbfile_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"]